Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.5
Smc4Q8CG47 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Smc4Q8CG47 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
Smc4Q8CG47 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Smc4Q8CG47 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Smc4Q8CG47 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC24.39■■□□□ 1.49
Smc4Q8CG47 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smc4Q8CG47 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC24.39■■□□□ 1.49
Smc4Q8CG47 Gm10129-202ENSMUST00000193100 1316 ntBASIC24.38■■□□□ 1.49
Smc4Q8CG47 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smc4Q8CG47 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Smc4Q8CG47 AC099934.2-201ENSMUST00000196389 70 ntBASIC24.38■■□□□ 1.49
Smc4Q8CG47 AC156953.1-201ENSMUST00000196953 70 ntBASIC24.38■■□□□ 1.49
Smc4Q8CG47 AC157822.2-201ENSMUST00000200291 70 ntBASIC24.38■■□□□ 1.49
Smc4Q8CG47 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smc4Q8CG47 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smc4Q8CG47 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smc4Q8CG47 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smc4Q8CG47 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smc4Q8CG47 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smc4Q8CG47 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Smc4Q8CG47 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Smc4Q8CG47 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Smc4Q8CG47 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC24.37■■□□□ 1.49
Smc4Q8CG47 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
Smc4Q8CG47 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC24.37■■□□□ 1.49
Smc4Q8CG47 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Smc4Q8CG47 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smc4Q8CG47 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smc4Q8CG47 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc4Q8CG47 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Smc4Q8CG47 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Smc4Q8CG47 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
Smc4Q8CG47 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc4Q8CG47 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc4Q8CG47 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc4Q8CG47 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc4Q8CG47 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC24.36■■□□□ 1.49
Smc4Q8CG47 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Smc4Q8CG47 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc4Q8CG47 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc4Q8CG47 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.35■■□□□ 1.49
Smc4Q8CG47 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc4Q8CG47 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc4Q8CG47 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Smc4Q8CG47 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC24.35■■□□□ 1.49
Smc4Q8CG47 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc4Q8CG47 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Smc4Q8CG47 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Smc4Q8CG47 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Smc4Q8CG47 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc4Q8CG47 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC24.34■■□□□ 1.49
Smc4Q8CG47 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Smc4Q8CG47 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc4Q8CG47 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc4Q8CG47 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc4Q8CG47 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Smc4Q8CG47 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Smc4Q8CG47 Snhg20-203ENSMUST00000182811 2153 ntBASIC24.33■■□□□ 1.49
Smc4Q8CG47 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC24.33■■□□□ 1.49
Smc4Q8CG47 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Smc4Q8CG47 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.33■■□□□ 1.49
Smc4Q8CG47 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Smc4Q8CG47 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Smc4Q8CG47 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Smc4Q8CG47 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
Smc4Q8CG47 Gm37035-201ENSMUST00000194809 2148 ntBASIC24.32■■□□□ 1.48
Smc4Q8CG47 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc4Q8CG47 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc4Q8CG47 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc4Q8CG47 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc4Q8CG47 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.32■■□□□ 1.48
Smc4Q8CG47 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC24.32■■□□□ 1.48
Smc4Q8CG47 Gm42642-201ENSMUST00000200683 355 ntBASIC24.32■■□□□ 1.48
Smc4Q8CG47 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc4Q8CG47 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc4Q8CG47 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc4Q8CG47 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc4Q8CG47 Gm15043-201ENSMUST00000118843 1543 ntBASIC24.31■■□□□ 1.48
Smc4Q8CG47 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smc4Q8CG47 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Smc4Q8CG47 Gm27801-201ENSMUST00000184174 223 ntBASIC24.31■■□□□ 1.48
Smc4Q8CG47 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Smc4Q8CG47 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smc4Q8CG47 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smc4Q8CG47 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc4Q8CG47 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.3■■□□□ 1.48
Smc4Q8CG47 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc4Q8CG47 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc4Q8CG47 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc4Q8CG47 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc4Q8CG47 AC152827.1-201ENSMUST00000221143 2189 ntBASIC24.3■■□□□ 1.48
Smc4Q8CG47 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC24.29■■□□□ 1.48
Smc4Q8CG47 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc4Q8CG47 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc4Q8CG47 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Smc4Q8CG47 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.29■■□□□ 1.48
Smc4Q8CG47 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc4Q8CG47 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Smc4Q8CG47 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms