Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm6433-201ENSMUST00000118634 875 ntBASIC31.39■■■□□ 2.62
Pabpn1Q8CCS6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Pabpn1Q8CCS6 CT030146.1-201ENSMUST00000220919 217 ntBASIC31.39■■■□□ 2.62
Pabpn1Q8CCS6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
Pabpn1Q8CCS6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Pabpn1Q8CCS6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC31.38■■■□□ 2.61
Pabpn1Q8CCS6 Mir1199-201ENSMUST00000117015 119 ntBASIC31.38■■■□□ 2.61
Pabpn1Q8CCS6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Pabpn1Q8CCS6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Pabpn1Q8CCS6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pabpn1Q8CCS6 Mir6236-201ENSMUST00000184437 123 ntBASIC31.37■■■□□ 2.61
Pabpn1Q8CCS6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pabpn1Q8CCS6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pabpn1Q8CCS6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Pabpn1Q8CCS6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Pabpn1Q8CCS6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Pabpn1Q8CCS6 Gm37563-201ENSMUST00000192580 1513 ntBASIC31.36■■■□□ 2.61
Pabpn1Q8CCS6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Pabpn1Q8CCS6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC31.36■■■□□ 2.61
Pabpn1Q8CCS6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC31.36■■■□□ 2.61
Pabpn1Q8CCS6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Pabpn1Q8CCS6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 Gm10698-201ENSMUST00000182663 604 ntBASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 Gm43799-201ENSMUST00000201845 579 ntBASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pabpn1Q8CCS6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC31.34■■■□□ 2.61
Pabpn1Q8CCS6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Pabpn1Q8CCS6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pabpn1Q8CCS6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pabpn1Q8CCS6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pabpn1Q8CCS6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Pabpn1Q8CCS6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pabpn1Q8CCS6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pabpn1Q8CCS6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pabpn1Q8CCS6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pabpn1Q8CCS6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Pabpn1Q8CCS6 Gm20472-201ENSMUST00000174403 1240 ntBASIC31.31■■■□□ 2.6
Pabpn1Q8CCS6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Pabpn1Q8CCS6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Pabpn1Q8CCS6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pabpn1Q8CCS6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
Pabpn1Q8CCS6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC31.3■■■□□ 2.6
Pabpn1Q8CCS6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pabpn1Q8CCS6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Pabpn1Q8CCS6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Pabpn1Q8CCS6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Pabpn1Q8CCS6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pabpn1Q8CCS6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
Pabpn1Q8CCS6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
Pabpn1Q8CCS6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pabpn1Q8CCS6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pabpn1Q8CCS6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Pabpn1Q8CCS6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pabpn1Q8CCS6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
Pabpn1Q8CCS6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC31.29■■■□□ 2.6
Pabpn1Q8CCS6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pabpn1Q8CCS6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pabpn1Q8CCS6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
Pabpn1Q8CCS6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Pabpn1Q8CCS6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pabpn1Q8CCS6 Gm18101-201ENSMUST00000215769 548 ntBASIC31.28■■■□□ 2.6
Pabpn1Q8CCS6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC31.28■■■□□ 2.6
Pabpn1Q8CCS6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Pabpn1Q8CCS6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Pabpn1Q8CCS6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Pabpn1Q8CCS6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Pabpn1Q8CCS6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Pabpn1Q8CCS6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pabpn1Q8CCS6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pabpn1Q8CCS6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pabpn1Q8CCS6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pabpn1Q8CCS6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pabpn1Q8CCS6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Pabpn1Q8CCS6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Pabpn1Q8CCS6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Pabpn1Q8CCS6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Pabpn1Q8CCS6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Pabpn1Q8CCS6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pabpn1Q8CCS6 Gm2559-201ENSMUST00000201323 363 ntBASIC31.25■■■□□ 2.59
Pabpn1Q8CCS6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pabpn1Q8CCS6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pabpn1Q8CCS6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Pabpn1Q8CCS6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pabpn1Q8CCS6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pabpn1Q8CCS6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Pabpn1Q8CCS6 Gm10517-202ENSMUST00000192970 758 ntBASIC31.24■■■□□ 2.59
Pabpn1Q8CCS6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pabpn1Q8CCS6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Pabpn1Q8CCS6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
Pabpn1Q8CCS6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Pabpn1Q8CCS6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Pabpn1Q8CCS6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC31.24■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms