Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ska3Q8C263 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Ska3Q8C263 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ska3Q8C263 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ska3Q8C263 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ska3Q8C263 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ska3Q8C263 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ska3Q8C263 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ska3Q8C263 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ska3Q8C263 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.52■□□□□ 0.55
Ska3Q8C263 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ska3Q8C263 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ska3Q8C263 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ska3Q8C263 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ska3Q8C263 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ska3Q8C263 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ska3Q8C263 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ska3Q8C263 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ska3Q8C263 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ska3Q8C263 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ska3Q8C263 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ska3Q8C263 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ska3Q8C263 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ska3Q8C263 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ska3Q8C263 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ska3Q8C263 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ska3Q8C263 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ska3Q8C263 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ska3Q8C263 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Ska3Q8C263 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ska3Q8C263 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.5■□□□□ 0.55
Ska3Q8C263 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.5■□□□□ 0.55
Ska3Q8C263 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ska3Q8C263 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.49■□□□□ 0.55
Ska3Q8C263 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ska3Q8C263 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ska3Q8C263 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ska3Q8C263 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ska3Q8C263 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ska3Q8C263 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ska3Q8C263 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ska3Q8C263 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.48■□□□□ 0.55
Ska3Q8C263 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Ska3Q8C263 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.48■□□□□ 0.55
Ska3Q8C263 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Ska3Q8C263 Spcs1-204ENSMUST00000226782 949 ntBASIC18.48■□□□□ 0.55
Ska3Q8C263 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ska3Q8C263 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ska3Q8C263 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ska3Q8C263 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ska3Q8C263 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ska3Q8C263 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ska3Q8C263 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ska3Q8C263 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ska3Q8C263 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ska3Q8C263 Mir7075-201ENSMUST00000184187 82 ntBASIC18.47■□□□□ 0.55
Ska3Q8C263 Gm45417-201ENSMUST00000209533 758 ntBASIC18.47■□□□□ 0.55
Ska3Q8C263 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.47■□□□□ 0.55
Ska3Q8C263 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ska3Q8C263 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ska3Q8C263 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ska3Q8C263 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ska3Q8C263 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ska3Q8C263 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Ska3Q8C263 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ska3Q8C263 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ska3Q8C263 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ska3Q8C263 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ska3Q8C263 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ska3Q8C263 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.46■□□□□ 0.54
Ska3Q8C263 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ska3Q8C263 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ska3Q8C263 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ska3Q8C263 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.45■□□□□ 0.54
Ska3Q8C263 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms