Protein–RNA interactions for Protein: Q8C1C8

Pnma1, Paraneoplastic antigen Ma1 homolog, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnma1Q8C1C8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pnma1Q8C1C8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pnma1Q8C1C8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.78■■□□□ 1.08
Pnma1Q8C1C8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pnma1Q8C1C8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pnma1Q8C1C8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pnma1Q8C1C8 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.77■■□□□ 1.08
Pnma1Q8C1C8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pnma1Q8C1C8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.77■■□□□ 1.08
Pnma1Q8C1C8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pnma1Q8C1C8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pnma1Q8C1C8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pnma1Q8C1C8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pnma1Q8C1C8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.77■■□□□ 1.07
Pnma1Q8C1C8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pnma1Q8C1C8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.76■■□□□ 1.07
Pnma1Q8C1C8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pnma1Q8C1C8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pnma1Q8C1C8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.76■■□□□ 1.07
Pnma1Q8C1C8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.76■■□□□ 1.07
Pnma1Q8C1C8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pnma1Q8C1C8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pnma1Q8C1C8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pnma1Q8C1C8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Pnma1Q8C1C8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.76■■□□□ 1.07
Pnma1Q8C1C8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pnma1Q8C1C8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pnma1Q8C1C8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pnma1Q8C1C8 Gm18284-201ENSMUST00000172604 624 ntBASIC21.75■■□□□ 1.07
Pnma1Q8C1C8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pnma1Q8C1C8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Pnma1Q8C1C8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pnma1Q8C1C8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pnma1Q8C1C8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pnma1Q8C1C8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Pnma1Q8C1C8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pnma1Q8C1C8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pnma1Q8C1C8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pnma1Q8C1C8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pnma1Q8C1C8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pnma1Q8C1C8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pnma1Q8C1C8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pnma1Q8C1C8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pnma1Q8C1C8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pnma1Q8C1C8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pnma1Q8C1C8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pnma1Q8C1C8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pnma1Q8C1C8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pnma1Q8C1C8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pnma1Q8C1C8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.71■■□□□ 1.07
Pnma1Q8C1C8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.71■■□□□ 1.07
Pnma1Q8C1C8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.71■■□□□ 1.07
Pnma1Q8C1C8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pnma1Q8C1C8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pnma1Q8C1C8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.7■■□□□ 1.06
Pnma1Q8C1C8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.7■■□□□ 1.06
Pnma1Q8C1C8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pnma1Q8C1C8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pnma1Q8C1C8 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.69■■□□□ 1.06
Pnma1Q8C1C8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pnma1Q8C1C8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Pnma1Q8C1C8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Pnma1Q8C1C8 Gm8495-201ENSMUST00000188740 694 ntBASIC21.69■■□□□ 1.06
Pnma1Q8C1C8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pnma1Q8C1C8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pnma1Q8C1C8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pnma1Q8C1C8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Pnma1Q8C1C8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Pnma1Q8C1C8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
Pnma1Q8C1C8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pnma1Q8C1C8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pnma1Q8C1C8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.68■■□□□ 1.06
Pnma1Q8C1C8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms