Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.04■□□□□ 0.8
Usp43Q8BUM9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp43Q8BUM9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp43Q8BUM9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp43Q8BUM9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp43Q8BUM9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Usp43Q8BUM9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.03■□□□□ 0.8
Usp43Q8BUM9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp43Q8BUM9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp43Q8BUM9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.03■□□□□ 0.8
Usp43Q8BUM9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp43Q8BUM9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp43Q8BUM9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp43Q8BUM9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Usp43Q8BUM9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp43Q8BUM9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp43Q8BUM9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp43Q8BUM9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp43Q8BUM9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.02■□□□□ 0.8
Usp43Q8BUM9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp43Q8BUM9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp43Q8BUM9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Usp43Q8BUM9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
Usp43Q8BUM9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp43Q8BUM9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp43Q8BUM9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Usp43Q8BUM9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp43Q8BUM9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.01■□□□□ 0.79
Usp43Q8BUM9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp43Q8BUM9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp43Q8BUM9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp43Q8BUM9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20■□□□□ 0.79
Usp43Q8BUM9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp43Q8BUM9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20■□□□□ 0.79
Usp43Q8BUM9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20■□□□□ 0.79
Usp43Q8BUM9 Gm10209-201ENSMUST00000203397 1607 ntBASIC20■□□□□ 0.79
Usp43Q8BUM9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Usp43Q8BUM9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Usp43Q8BUM9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp43Q8BUM9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Usp43Q8BUM9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp43Q8BUM9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Gm43137-201ENSMUST00000198052 594 ntBASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Usp43Q8BUM9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp43Q8BUM9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp43Q8BUM9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp43Q8BUM9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp43Q8BUM9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Usp43Q8BUM9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Usp43Q8BUM9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Usp43Q8BUM9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp43Q8BUM9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp43Q8BUM9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Usp43Q8BUM9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp43Q8BUM9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Usp43Q8BUM9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Usp43Q8BUM9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Usp43Q8BUM9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp43Q8BUM9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp43Q8BUM9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Usp43Q8BUM9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Usp43Q8BUM9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp43Q8BUM9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.95■□□□□ 0.78
Usp43Q8BUM9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
Usp43Q8BUM9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp43Q8BUM9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp43Q8BUM9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Usp43Q8BUM9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp43Q8BUM9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Usp43Q8BUM9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usp43Q8BUM9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms