Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubr7Q8BU04 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ubr7Q8BU04 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ubr7Q8BU04 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ubr7Q8BU04 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr7Q8BU04 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr7Q8BU04 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr7Q8BU04 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.02■□□□□ 0.8
Ubr7Q8BU04 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ubr7Q8BU04 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Ubr7Q8BU04 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.02■□□□□ 0.8
Ubr7Q8BU04 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ubr7Q8BU04 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ubr7Q8BU04 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ubr7Q8BU04 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ubr7Q8BU04 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Gm10493-201ENSMUST00000097270 612 ntBASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ubr7Q8BU04 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr7Q8BU04 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ubr7Q8BU04 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr7Q8BU04 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr7Q8BU04 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20■□□□□ 0.79
Ubr7Q8BU04 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20■□□□□ 0.79
Ubr7Q8BU04 Gm5874-201ENSMUST00000096101 508 ntBASIC20■□□□□ 0.79
Ubr7Q8BU04 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr7Q8BU04 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr7Q8BU04 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ubr7Q8BU04 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubr7Q8BU04 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.99■□□□□ 0.79
Ubr7Q8BU04 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubr7Q8BU04 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.99■□□□□ 0.79
Ubr7Q8BU04 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
Ubr7Q8BU04 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.99■□□□□ 0.79
Ubr7Q8BU04 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ubr7Q8BU04 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.99■□□□□ 0.79
Ubr7Q8BU04 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ubr7Q8BU04 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ubr7Q8BU04 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr7Q8BU04 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ubr7Q8BU04 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ubr7Q8BU04 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ubr7Q8BU04 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubr7Q8BU04 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr7Q8BU04 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.97■□□□□ 0.79
Ubr7Q8BU04 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Ubr7Q8BU04 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr7Q8BU04 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr7Q8BU04 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubr7Q8BU04 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubr7Q8BU04 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr7Q8BU04 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr7Q8BU04 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr7Q8BU04 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr7Q8BU04 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr7Q8BU04 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ubr7Q8BU04 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubr7Q8BU04 AA386476-201ENSMUST00000098781 1665 ntBASIC19.94■□□□□ 0.78
Ubr7Q8BU04 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr7Q8BU04 Gm27801-201ENSMUST00000184174 223 ntBASIC19.94■□□□□ 0.78
Ubr7Q8BU04 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr7Q8BU04 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr7Q8BU04 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubr7Q8BU04 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ubr7Q8BU04 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ubr7Q8BU04 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms