Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap1Q8BTW8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap1Q8BTW8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap1Q8BTW8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap1Q8BTW8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap1Q8BTW8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.74■□□□□ 0.59
Cdk5rap1Q8BTW8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdk5rap1Q8BTW8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap1Q8BTW8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap1Q8BTW8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdk5rap1Q8BTW8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.73■□□□□ 0.59
Cdk5rap1Q8BTW8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cdk5rap1Q8BTW8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap1Q8BTW8 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.73■□□□□ 0.59
Cdk5rap1Q8BTW8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdk5rap1Q8BTW8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdk5rap1Q8BTW8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdk5rap1Q8BTW8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Cdk5rap1Q8BTW8 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.71■□□□□ 0.58
Cdk5rap1Q8BTW8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdk5rap1Q8BTW8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap1Q8BTW8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap1Q8BTW8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap1Q8BTW8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdk5rap1Q8BTW8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.69■□□□□ 0.58
Cdk5rap1Q8BTW8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap1Q8BTW8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Cdk5rap1Q8BTW8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdk5rap1Q8BTW8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cdk5rap1Q8BTW8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap1Q8BTW8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap1Q8BTW8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.68■□□□□ 0.58
Cdk5rap1Q8BTW8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap1Q8BTW8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap1Q8BTW8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap1Q8BTW8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdk5rap1Q8BTW8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap1Q8BTW8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Cdk5rap1Q8BTW8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap1Q8BTW8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap1Q8BTW8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap1Q8BTW8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.67■□□□□ 0.58
Cdk5rap1Q8BTW8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap1Q8BTW8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap1Q8BTW8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap1Q8BTW8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdk5rap1Q8BTW8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Cdk5rap1Q8BTW8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms