Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cpsf4Q8BQZ5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cpsf4Q8BQZ5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf4Q8BQZ5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf4Q8BQZ5 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf4Q8BQZ5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf4Q8BQZ5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf4Q8BQZ5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.05■□□□□ 0.64
Cpsf4Q8BQZ5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf4Q8BQZ5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cpsf4Q8BQZ5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cpsf4Q8BQZ5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cpsf4Q8BQZ5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf4Q8BQZ5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cpsf4Q8BQZ5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf4Q8BQZ5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf4Q8BQZ5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.02■□□□□ 0.64
Cpsf4Q8BQZ5 Golph3-202ENSMUST00000226517 2359 ntBASIC19.02■□□□□ 0.64
Cpsf4Q8BQZ5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf4Q8BQZ5 Gm27454-201ENSMUST00000185090 204 ntBASIC19.02■□□□□ 0.64
Cpsf4Q8BQZ5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf4Q8BQZ5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cpsf4Q8BQZ5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf4Q8BQZ5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf4Q8BQZ5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf4Q8BQZ5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf4Q8BQZ5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cpsf4Q8BQZ5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cpsf4Q8BQZ5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf4Q8BQZ5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf4Q8BQZ5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf4Q8BQZ5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf4Q8BQZ5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cpsf4Q8BQZ5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19■□□□□ 0.63
Cpsf4Q8BQZ5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf4Q8BQZ5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms