Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Col16a1Q8BLX7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col16a1Q8BLX7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Col16a1Q8BLX7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col16a1Q8BLX7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col16a1Q8BLX7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col16a1Q8BLX7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Col16a1Q8BLX7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col16a1Q8BLX7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col16a1Q8BLX7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col16a1Q8BLX7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col16a1Q8BLX7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Col16a1Q8BLX7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col16a1Q8BLX7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col16a1Q8BLX7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Col16a1Q8BLX7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC26.34■■□□□ 1.81
Col16a1Q8BLX7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col16a1Q8BLX7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col16a1Q8BLX7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col16a1Q8BLX7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC26.34■■□□□ 1.81
Col16a1Q8BLX7 Gm32051-202ENSMUST00000197905 2385 ntBASIC26.34■■□□□ 1.81
Col16a1Q8BLX7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC26.33■■□□□ 1.81
Col16a1Q8BLX7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Col16a1Q8BLX7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Col16a1Q8BLX7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Col16a1Q8BLX7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col16a1Q8BLX7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
Col16a1Q8BLX7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
Col16a1Q8BLX7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Col16a1Q8BLX7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC26.32■■□□□ 1.8
Col16a1Q8BLX7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Col16a1Q8BLX7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col16a1Q8BLX7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col16a1Q8BLX7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col16a1Q8BLX7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC26.32■■□□□ 1.8
Col16a1Q8BLX7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
Col16a1Q8BLX7 Gm8520-201ENSMUST00000186517 868 ntBASIC26.32■■□□□ 1.8
Col16a1Q8BLX7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Col16a1Q8BLX7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Col16a1Q8BLX7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col16a1Q8BLX7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col16a1Q8BLX7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col16a1Q8BLX7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Col16a1Q8BLX7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col16a1Q8BLX7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC26.3■■□□□ 1.8
Col16a1Q8BLX7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col16a1Q8BLX7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col16a1Q8BLX7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Col16a1Q8BLX7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col16a1Q8BLX7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 Gm3807-201ENSMUST00000193520 1168 ntBASIC26.29■■□□□ 1.8
Col16a1Q8BLX7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Col16a1Q8BLX7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col16a1Q8BLX7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col16a1Q8BLX7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col16a1Q8BLX7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC26.28■■□□□ 1.8
Col16a1Q8BLX7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Col16a1Q8BLX7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC26.28■■□□□ 1.8
Col16a1Q8BLX7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col16a1Q8BLX7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Col16a1Q8BLX7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Col16a1Q8BLX7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col16a1Q8BLX7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col16a1Q8BLX7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC26.27■■□□□ 1.8
Col16a1Q8BLX7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC26.27■■□□□ 1.8
Col16a1Q8BLX7 Gm20049-201ENSMUST00000219950 730 ntBASIC26.27■■□□□ 1.8
Col16a1Q8BLX7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col16a1Q8BLX7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col16a1Q8BLX7 Gm7290-201ENSMUST00000104990 617 ntBASIC26.26■■□□□ 1.79
Col16a1Q8BLX7 Gm12918-201ENSMUST00000120234 636 ntBASIC26.26■■□□□ 1.79
Col16a1Q8BLX7 Gm15710-201ENSMUST00000121821 636 ntBASIC26.26■■□□□ 1.79
Col16a1Q8BLX7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC26.26■■□□□ 1.79
Col16a1Q8BLX7 Gm5075-201ENSMUST00000196916 622 ntBASIC26.26■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms