Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SynbQ8BI41 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SynbQ8BI41 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.71■□□□□ 0.59
SynbQ8BI41 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SynbQ8BI41 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SynbQ8BI41 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
SynbQ8BI41 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SynbQ8BI41 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SynbQ8BI41 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SynbQ8BI41 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SynbQ8BI41 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SynbQ8BI41 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SynbQ8BI41 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SynbQ8BI41 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SynbQ8BI41 Gm42642-201ENSMUST00000200683 355 ntBASIC18.7■□□□□ 0.58
SynbQ8BI41 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SynbQ8BI41 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SynbQ8BI41 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SynbQ8BI41 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.69■□□□□ 0.58
SynbQ8BI41 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SynbQ8BI41 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SynbQ8BI41 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SynbQ8BI41 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SynbQ8BI41 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SynbQ8BI41 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SynbQ8BI41 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SynbQ8BI41 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.68■□□□□ 0.58
SynbQ8BI41 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SynbQ8BI41 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SynbQ8BI41 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.68■□□□□ 0.58
SynbQ8BI41 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SynbQ8BI41 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.68■□□□□ 0.58
SynbQ8BI41 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.68■□□□□ 0.58
SynbQ8BI41 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.68■□□□□ 0.58
SynbQ8BI41 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SynbQ8BI41 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.67■□□□□ 0.58
SynbQ8BI41 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SynbQ8BI41 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SynbQ8BI41 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SynbQ8BI41 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SynbQ8BI41 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SynbQ8BI41 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.67■□□□□ 0.58
SynbQ8BI41 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SynbQ8BI41 Gm40848-201ENSMUST00000221998 324 ntBASIC18.67■□□□□ 0.58
SynbQ8BI41 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SynbQ8BI41 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SynbQ8BI41 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SynbQ8BI41 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SynbQ8BI41 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SynbQ8BI41 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SynbQ8BI41 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SynbQ8BI41 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SynbQ8BI41 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SynbQ8BI41 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.66■□□□□ 0.58
SynbQ8BI41 Smad6-203ENSMUST00000179458 273 ntBASIC18.66■□□□□ 0.58
SynbQ8BI41 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SynbQ8BI41 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SynbQ8BI41 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SynbQ8BI41 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SynbQ8BI41 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SynbQ8BI41 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.66■□□□□ 0.58
SynbQ8BI41 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SynbQ8BI41 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SynbQ8BI41 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynbQ8BI41 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
SynbQ8BI41 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SynbQ8BI41 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.65■□□□□ 0.58
SynbQ8BI41 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynbQ8BI41 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynbQ8BI41 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.65■□□□□ 0.58
SynbQ8BI41 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SynbQ8BI41 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynbQ8BI41 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SynbQ8BI41 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SynbQ8BI41 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.65■□□□□ 0.58
SynbQ8BI41 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SynbQ8BI41 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SynbQ8BI41 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SynbQ8BI41 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SynbQ8BI41 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SynbQ8BI41 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.64■□□□□ 0.57
SynbQ8BI41 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.64■□□□□ 0.57
SynbQ8BI41 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SynbQ8BI41 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SynbQ8BI41 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SynbQ8BI41 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SynbQ8BI41 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SynbQ8BI41 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SynbQ8BI41 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SynbQ8BI41 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SynbQ8BI41 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SynbQ8BI41 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
SynbQ8BI41 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SynbQ8BI41 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SynbQ8BI41 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.63■□□□□ 0.57
SynbQ8BI41 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SynbQ8BI41 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SynbQ8BI41 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.62■□□□□ 0.57
SynbQ8BI41 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.62■□□□□ 0.57
SynbQ8BI41 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms