Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nucks1Q80XU3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.08■□□□□ 0.97
Nucks1Q80XU3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.08■□□□□ 0.97
Nucks1Q80XU3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nucks1Q80XU3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nucks1Q80XU3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nucks1Q80XU3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Nucks1Q80XU3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.07■□□□□ 0.96
Nucks1Q80XU3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nucks1Q80XU3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nucks1Q80XU3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nucks1Q80XU3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Nucks1Q80XU3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nucks1Q80XU3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nucks1Q80XU3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nucks1Q80XU3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nucks1Q80XU3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nucks1Q80XU3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nucks1Q80XU3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nucks1Q80XU3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nucks1Q80XU3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nucks1Q80XU3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nucks1Q80XU3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nucks1Q80XU3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nucks1Q80XU3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nucks1Q80XU3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nucks1Q80XU3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.05■□□□□ 0.96
Nucks1Q80XU3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.05■□□□□ 0.96
Nucks1Q80XU3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.05■□□□□ 0.96
Nucks1Q80XU3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.05■□□□□ 0.96
Nucks1Q80XU3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Nucks1Q80XU3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nucks1Q80XU3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nucks1Q80XU3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nucks1Q80XU3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nucks1Q80XU3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nucks1Q80XU3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
Nucks1Q80XU3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Nucks1Q80XU3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nucks1Q80XU3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nucks1Q80XU3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nucks1Q80XU3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nucks1Q80XU3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Nucks1Q80XU3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nucks1Q80XU3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nucks1Q80XU3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nucks1Q80XU3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nucks1Q80XU3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.03■□□□□ 0.96
Nucks1Q80XU3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.03■□□□□ 0.96
Nucks1Q80XU3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nucks1Q80XU3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nucks1Q80XU3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nucks1Q80XU3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nucks1Q80XU3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nucks1Q80XU3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nucks1Q80XU3 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.02■□□□□ 0.96
Nucks1Q80XU3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.02■□□□□ 0.96
Nucks1Q80XU3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Nucks1Q80XU3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Nucks1Q80XU3 Rps24-207ENSMUST00000224568 714 ntBASIC21.02■□□□□ 0.96
Nucks1Q80XU3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nucks1Q80XU3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Nucks1Q80XU3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nucks1Q80XU3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nucks1Q80XU3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Nucks1Q80XU3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nucks1Q80XU3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nucks1Q80XU3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Nucks1Q80XU3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nucks1Q80XU3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nucks1Q80XU3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nucks1Q80XU3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nucks1Q80XU3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Nucks1Q80XU3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21■□□□□ 0.95
Nucks1Q80XU3 Gm45102-201ENSMUST00000207427 857 ntBASIC21■□□□□ 0.95
Nucks1Q80XU3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nucks1Q80XU3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nucks1Q80XU3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21■□□□□ 0.95
Nucks1Q80XU3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21■□□□□ 0.95
Nucks1Q80XU3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nucks1Q80XU3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Nucks1Q80XU3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nucks1Q80XU3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Nucks1Q80XU3 Gm14117-201ENSMUST00000122417 843 ntBASIC20.99■□□□□ 0.95
Nucks1Q80XU3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.99■□□□□ 0.95
Nucks1Q80XU3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nucks1Q80XU3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.99■□□□□ 0.95
Nucks1Q80XU3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nucks1Q80XU3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nucks1Q80XU3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nucks1Q80XU3 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.98■□□□□ 0.95
Nucks1Q80XU3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nucks1Q80XU3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nucks1Q80XU3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nucks1Q80XU3 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.97■□□□□ 0.95
Nucks1Q80XU3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nucks1Q80XU3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nucks1Q80XU3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Nucks1Q80XU3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nucks1Q80XU3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms