Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm4Q80XG9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Lrrtm4Q80XG9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.25■□□□□ 0.67
Lrrtm4Q80XG9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm4Q80XG9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm4Q80XG9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm4Q80XG9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.25■□□□□ 0.67
Lrrtm4Q80XG9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lrrtm4Q80XG9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm4Q80XG9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrrtm4Q80XG9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Gm40848-201ENSMUST00000221998 324 ntBASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.24■□□□□ 0.67
Lrrtm4Q80XG9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm4Q80XG9 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.23■□□□□ 0.67
Lrrtm4Q80XG9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm4Q80XG9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm4Q80XG9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.23■□□□□ 0.67
Lrrtm4Q80XG9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm4Q80XG9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Lrrtm4Q80XG9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm4Q80XG9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm4Q80XG9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrrtm4Q80XG9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrtm4Q80XG9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrtm4Q80XG9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrtm4Q80XG9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrtm4Q80XG9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lrrtm4Q80XG9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrtm4Q80XG9 Gm43060-201ENSMUST00000200621 289 ntBASIC19.22■□□□□ 0.67
Lrrtm4Q80XG9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrrtm4Q80XG9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrrtm4Q80XG9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lrrtm4Q80XG9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrtm4Q80XG9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrtm4Q80XG9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrtm4Q80XG9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lrrtm4Q80XG9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrtm4Q80XG9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrtm4Q80XG9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrtm4Q80XG9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Lrrtm4Q80XG9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.18■□□□□ 0.66
Lrrtm4Q80XG9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrtm4Q80XG9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrtm4Q80XG9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.18■□□□□ 0.66
Lrrtm4Q80XG9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.18■□□□□ 0.66
Lrrtm4Q80XG9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrtm4Q80XG9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrtm4Q80XG9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrtm4Q80XG9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.17■□□□□ 0.66
Lrrtm4Q80XG9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrtm4Q80XG9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.16■□□□□ 0.66
Lrrtm4Q80XG9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms