Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc116Q80X53 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc116Q80X53 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc116Q80X53 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc116Q80X53 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.34■□□□□ 0.69
Ccdc116Q80X53 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc116Q80X53 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc116Q80X53 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc116Q80X53 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc116Q80X53 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.34■□□□□ 0.69
Ccdc116Q80X53 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
Ccdc116Q80X53 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ccdc116Q80X53 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc116Q80X53 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc116Q80X53 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc116Q80X53 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc116Q80X53 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc116Q80X53 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc116Q80X53 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ccdc116Q80X53 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc116Q80X53 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc116Q80X53 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc116Q80X53 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc116Q80X53 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc116Q80X53 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.32■□□□□ 0.68
Ccdc116Q80X53 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc116Q80X53 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc116Q80X53 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc116Q80X53 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.31■□□□□ 0.68
Ccdc116Q80X53 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Ccdc116Q80X53 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc116Q80X53 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc116Q80X53 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc116Q80X53 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc116Q80X53 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc116Q80X53 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc116Q80X53 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc116Q80X53 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc116Q80X53 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.29■□□□□ 0.68
Ccdc116Q80X53 Golgb1-201ENSMUST00000023534 498 ntBASIC19.29■□□□□ 0.68
Ccdc116Q80X53 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Ccdc116Q80X53 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc116Q80X53 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc116Q80X53 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc116Q80X53 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.27■□□□□ 0.68
Ccdc116Q80X53 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc116Q80X53 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc116Q80X53 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc116Q80X53 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc116Q80X53 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc116Q80X53 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc116Q80X53 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc116Q80X53 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc116Q80X53 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc116Q80X53 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc116Q80X53 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc116Q80X53 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc116Q80X53 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc116Q80X53 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc116Q80X53 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc116Q80X53 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc116Q80X53 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc116Q80X53 Gm12922-201ENSMUST00000120626 809 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms