Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Otop1Q80VM9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Otop1Q80VM9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Otop1Q80VM9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Otop1Q80VM9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Otop1Q80VM9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Otop1Q80VM9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Otop1Q80VM9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Otop1Q80VM9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.94■□□□□ 0.62
Otop1Q80VM9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Otop1Q80VM9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Otop1Q80VM9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Otop1Q80VM9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.93■□□□□ 0.62
Otop1Q80VM9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Otop1Q80VM9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Otop1Q80VM9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Otop1Q80VM9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.92■□□□□ 0.62
Otop1Q80VM9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Otop1Q80VM9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Otop1Q80VM9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Otop1Q80VM9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Otop1Q80VM9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Otop1Q80VM9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Otop1Q80VM9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Otop1Q80VM9 Reep4-203ENSMUST00000226563 1444 ntBASIC18.91■□□□□ 0.62
Otop1Q80VM9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.91■□□□□ 0.62
Otop1Q80VM9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Otop1Q80VM9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.9■□□□□ 0.62
Otop1Q80VM9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.9■□□□□ 0.62
Otop1Q80VM9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Otop1Q80VM9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.9■□□□□ 0.62
Otop1Q80VM9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Otop1Q80VM9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Otop1Q80VM9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Otop1Q80VM9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Otop1Q80VM9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Otop1Q80VM9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Otop1Q80VM9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otop1Q80VM9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Otop1Q80VM9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otop1Q80VM9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otop1Q80VM9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otop1Q80VM9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otop1Q80VM9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otop1Q80VM9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Otop1Q80VM9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Otop1Q80VM9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Otop1Q80VM9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Otop1Q80VM9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Otop1Q80VM9 Gm12441-201ENSMUST00000121806 588 ntBASIC18.87■□□□□ 0.61
Otop1Q80VM9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Otop1Q80VM9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.87■□□□□ 0.61
Otop1Q80VM9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Otop1Q80VM9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.87■□□□□ 0.61
Otop1Q80VM9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Otop1Q80VM9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Otop1Q80VM9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otop1Q80VM9 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.86■□□□□ 0.61
Otop1Q80VM9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otop1Q80VM9 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.86■□□□□ 0.61
Otop1Q80VM9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Otop1Q80VM9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Otop1Q80VM9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms