Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3d21Q7TSG5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sh3d21Q7TSG5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.56■■□□□ 1.04
Sh3d21Q7TSG5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sh3d21Q7TSG5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3d21Q7TSG5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3d21Q7TSG5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3d21Q7TSG5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Sh3d21Q7TSG5 Gm21956-201ENSMUST00000179946 522 ntBASIC21.54■■□□□ 1.04
Sh3d21Q7TSG5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3d21Q7TSG5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Sh3d21Q7TSG5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sh3d21Q7TSG5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3d21Q7TSG5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3d21Q7TSG5 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.54■■□□□ 1.04
Sh3d21Q7TSG5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3d21Q7TSG5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3d21Q7TSG5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3d21Q7TSG5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3d21Q7TSG5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3d21Q7TSG5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.52■■□□□ 1.04
Sh3d21Q7TSG5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.52■■□□□ 1.03
Sh3d21Q7TSG5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Sh3d21Q7TSG5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3d21Q7TSG5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.51■■□□□ 1.03
Sh3d21Q7TSG5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Sh3d21Q7TSG5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3d21Q7TSG5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3d21Q7TSG5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3d21Q7TSG5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3d21Q7TSG5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Sh3d21Q7TSG5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3d21Q7TSG5 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.5■■□□□ 1.03
Sh3d21Q7TSG5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.5■■□□□ 1.03
Sh3d21Q7TSG5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.5■■□□□ 1.03
Sh3d21Q7TSG5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3d21Q7TSG5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.5■■□□□ 1.03
Sh3d21Q7TSG5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.5■■□□□ 1.03
Sh3d21Q7TSG5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
Sh3d21Q7TSG5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3d21Q7TSG5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3d21Q7TSG5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Sh3d21Q7TSG5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3d21Q7TSG5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Sh3d21Q7TSG5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3d21Q7TSG5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3d21Q7TSG5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Gm43137-201ENSMUST00000198052 594 ntBASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3d21Q7TSG5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3d21Q7TSG5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms