Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubfd1Q78JW9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubfd1Q78JW9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubfd1Q78JW9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubfd1Q78JW9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.27■□□□□ 0.68
Ubfd1Q78JW9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Ubfd1Q78JW9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.27■□□□□ 0.68
Ubfd1Q78JW9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubfd1Q78JW9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ubfd1Q78JW9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.27■□□□□ 0.67
Ubfd1Q78JW9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ubfd1Q78JW9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ubfd1Q78JW9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ubfd1Q78JW9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ubfd1Q78JW9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.26■□□□□ 0.67
Ubfd1Q78JW9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ubfd1Q78JW9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.26■□□□□ 0.67
Ubfd1Q78JW9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubfd1Q78JW9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubfd1Q78JW9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ubfd1Q78JW9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubfd1Q78JW9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubfd1Q78JW9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubfd1Q78JW9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
Ubfd1Q78JW9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubfd1Q78JW9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ubfd1Q78JW9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubfd1Q78JW9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubfd1Q78JW9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ubfd1Q78JW9 Gm42642-201ENSMUST00000200683 355 ntBASIC19.24■□□□□ 0.67
Ubfd1Q78JW9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubfd1Q78JW9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubfd1Q78JW9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubfd1Q78JW9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubfd1Q78JW9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ubfd1Q78JW9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubfd1Q78JW9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.22■□□□□ 0.67
Ubfd1Q78JW9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ubfd1Q78JW9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubfd1Q78JW9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ubfd1Q78JW9 Gm27801-201ENSMUST00000184174 223 ntBASIC19.22■□□□□ 0.67
Ubfd1Q78JW9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Ubfd1Q78JW9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ubfd1Q78JW9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubfd1Q78JW9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ubfd1Q78JW9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubfd1Q78JW9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubfd1Q78JW9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.21■□□□□ 0.67
Ubfd1Q78JW9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ubfd1Q78JW9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.21■□□□□ 0.67
Ubfd1Q78JW9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.21■□□□□ 0.67
Ubfd1Q78JW9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubfd1Q78JW9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubfd1Q78JW9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubfd1Q78JW9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubfd1Q78JW9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubfd1Q78JW9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubfd1Q78JW9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubfd1Q78JW9 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.19■□□□□ 0.66
Ubfd1Q78JW9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.19■□□□□ 0.66
Ubfd1Q78JW9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.19■□□□□ 0.66
Ubfd1Q78JW9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubfd1Q78JW9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubfd1Q78JW9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.19■□□□□ 0.66
Ubfd1Q78JW9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ubfd1Q78JW9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubfd1Q78JW9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ubfd1Q78JW9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ubfd1Q78JW9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms