Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Npc1l1Q6T3U4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Npc1l1Q6T3U4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Npc1l1Q6T3U4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Npc1l1Q6T3U4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Npc1l1Q6T3U4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Npc1l1Q6T3U4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Npc1l1Q6T3U4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Npc1l1Q6T3U4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Npc1l1Q6T3U4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.8■■□□□ 1.4
Npc1l1Q6T3U4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Npc1l1Q6T3U4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Npc1l1Q6T3U4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Npc1l1Q6T3U4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Npc1l1Q6T3U4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Npc1l1Q6T3U4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Npc1l1Q6T3U4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.79■■□□□ 1.4
Npc1l1Q6T3U4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.79■■□□□ 1.4
Npc1l1Q6T3U4 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.79■■□□□ 1.4
Npc1l1Q6T3U4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Npc1l1Q6T3U4 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.79■■□□□ 1.4
Npc1l1Q6T3U4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Npc1l1Q6T3U4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Npc1l1Q6T3U4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Npc1l1Q6T3U4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Npc1l1Q6T3U4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Npc1l1Q6T3U4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Npc1l1Q6T3U4 Gm37179-201ENSMUST00000194862 823 ntBASIC23.78■■□□□ 1.4
Npc1l1Q6T3U4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Npc1l1Q6T3U4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Npc1l1Q6T3U4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Npc1l1Q6T3U4 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.77■■□□□ 1.4
Npc1l1Q6T3U4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Npc1l1Q6T3U4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Npc1l1Q6T3U4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC23.77■■□□□ 1.4
Npc1l1Q6T3U4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Npc1l1Q6T3U4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Npc1l1Q6T3U4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Npc1l1Q6T3U4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
Npc1l1Q6T3U4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Npc1l1Q6T3U4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.76■■□□□ 1.39
Npc1l1Q6T3U4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Npc1l1Q6T3U4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Npc1l1Q6T3U4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Npc1l1Q6T3U4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Npc1l1Q6T3U4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Npc1l1Q6T3U4 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.76■■□□□ 1.39
Npc1l1Q6T3U4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.76■■□□□ 1.39
Npc1l1Q6T3U4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Npc1l1Q6T3U4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Npc1l1Q6T3U4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Npc1l1Q6T3U4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Npc1l1Q6T3U4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Npc1l1Q6T3U4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Gm11421-201ENSMUST00000122124 294 ntBASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Npc1l1Q6T3U4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Npc1l1Q6T3U4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Npc1l1Q6T3U4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.72■■□□□ 1.39
Npc1l1Q6T3U4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Npc1l1Q6T3U4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Npc1l1Q6T3U4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Npc1l1Q6T3U4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Npc1l1Q6T3U4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.71■■□□□ 1.39
Npc1l1Q6T3U4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Npc1l1Q6T3U4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Npc1l1Q6T3U4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Npc1l1Q6T3U4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Npc1l1Q6T3U4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.7■■□□□ 1.38
Npc1l1Q6T3U4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Npc1l1Q6T3U4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Npc1l1Q6T3U4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Npc1l1Q6T3U4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Npc1l1Q6T3U4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Npc1l1Q6T3U4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Npc1l1Q6T3U4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Npc1l1Q6T3U4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Npc1l1Q6T3U4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.69■■□□□ 1.38
Npc1l1Q6T3U4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Npc1l1Q6T3U4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms