Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Smarca1Q6PGB8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Smarca1Q6PGB8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Smarca1Q6PGB8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Smarca1Q6PGB8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Smarca1Q6PGB8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Smarca1Q6PGB8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.98■■□□□ 1.11
Smarca1Q6PGB8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Smarca1Q6PGB8 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.98■■□□□ 1.11
Smarca1Q6PGB8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Smarca1Q6PGB8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Smarca1Q6PGB8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Smarca1Q6PGB8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Smarca1Q6PGB8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smarca1Q6PGB8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smarca1Q6PGB8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smarca1Q6PGB8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Smarca1Q6PGB8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smarca1Q6PGB8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smarca1Q6PGB8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Smarca1Q6PGB8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smarca1Q6PGB8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smarca1Q6PGB8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Smarca1Q6PGB8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarca1Q6PGB8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.96■■□□□ 1.11
Smarca1Q6PGB8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.96■■□□□ 1.11
Smarca1Q6PGB8 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.96■■□□□ 1.11
Smarca1Q6PGB8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarca1Q6PGB8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smarca1Q6PGB8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.96■■□□□ 1.11
Smarca1Q6PGB8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smarca1Q6PGB8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smarca1Q6PGB8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Smarca1Q6PGB8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Smarca1Q6PGB8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarca1Q6PGB8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smarca1Q6PGB8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarca1Q6PGB8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smarca1Q6PGB8 Gm8493-201ENSMUST00000196881 489 ntBASIC21.94■■□□□ 1.1
Smarca1Q6PGB8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.94■■□□□ 1.1
Smarca1Q6PGB8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarca1Q6PGB8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarca1Q6PGB8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smarca1Q6PGB8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smarca1Q6PGB8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.93■■□□□ 1.1
Smarca1Q6PGB8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.93■■□□□ 1.1
Smarca1Q6PGB8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.93■■□□□ 1.1
Smarca1Q6PGB8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Smarca1Q6PGB8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smarca1Q6PGB8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarca1Q6PGB8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarca1Q6PGB8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarca1Q6PGB8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarca1Q6PGB8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarca1Q6PGB8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Smarca1Q6PGB8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarca1Q6PGB8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarca1Q6PGB8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarca1Q6PGB8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarca1Q6PGB8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarca1Q6PGB8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarca1Q6PGB8 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.91■■□□□ 1.1
Smarca1Q6PGB8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Smarca1Q6PGB8 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.9■■□□□ 1.1
Smarca1Q6PGB8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarca1Q6PGB8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarca1Q6PGB8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Smarca1Q6PGB8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Smarca1Q6PGB8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Smarca1Q6PGB8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smarca1Q6PGB8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Smarca1Q6PGB8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smarca1Q6PGB8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Smarca1Q6PGB8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smarca1Q6PGB8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Smarca1Q6PGB8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smarca1Q6PGB8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms