Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc85bQ6PDY0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc85bQ6PDY0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc85bQ6PDY0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc85bQ6PDY0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc85bQ6PDY0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Ccdc85bQ6PDY0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.56■□□□□ 0.88
Ccdc85bQ6PDY0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc85bQ6PDY0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc85bQ6PDY0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ccdc85bQ6PDY0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc85bQ6PDY0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccdc85bQ6PDY0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.55■□□□□ 0.88
Ccdc85bQ6PDY0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc85bQ6PDY0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc85bQ6PDY0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.55■□□□□ 0.88
Ccdc85bQ6PDY0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ccdc85bQ6PDY0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc85bQ6PDY0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ccdc85bQ6PDY0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc85bQ6PDY0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ccdc85bQ6PDY0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc85bQ6PDY0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc85bQ6PDY0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc85bQ6PDY0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc85bQ6PDY0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc85bQ6PDY0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc85bQ6PDY0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Ccdc85bQ6PDY0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc85bQ6PDY0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc85bQ6PDY0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc85bQ6PDY0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc85bQ6PDY0 Trmt13-210ENSMUST00000198454 880 ntBASIC20.53■□□□□ 0.88
Ccdc85bQ6PDY0 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.53■□□□□ 0.88
Ccdc85bQ6PDY0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc85bQ6PDY0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc85bQ6PDY0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc85bQ6PDY0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc85bQ6PDY0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc85bQ6PDY0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc85bQ6PDY0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.52■□□□□ 0.88
Ccdc85bQ6PDY0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc85bQ6PDY0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc85bQ6PDY0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc85bQ6PDY0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc85bQ6PDY0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ccdc85bQ6PDY0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.51■□□□□ 0.87
Ccdc85bQ6PDY0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.51■□□□□ 0.87
Ccdc85bQ6PDY0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc85bQ6PDY0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ccdc85bQ6PDY0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc85bQ6PDY0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc85bQ6PDY0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc85bQ6PDY0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ccdc85bQ6PDY0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc85bQ6PDY0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.5■□□□□ 0.87
Ccdc85bQ6PDY0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ccdc85bQ6PDY0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc85bQ6PDY0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc85bQ6PDY0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.49■□□□□ 0.87
Ccdc85bQ6PDY0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Ccdc85bQ6PDY0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.49■□□□□ 0.87
Ccdc85bQ6PDY0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc85bQ6PDY0 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.49■□□□□ 0.87
Ccdc85bQ6PDY0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc85bQ6PDY0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc85bQ6PDY0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.49■□□□□ 0.87
Ccdc85bQ6PDY0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc85bQ6PDY0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc85bQ6PDY0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc85bQ6PDY0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc85bQ6PDY0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.48■□□□□ 0.87
Ccdc85bQ6PDY0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc85bQ6PDY0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.48■□□□□ 0.87
Ccdc85bQ6PDY0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc85bQ6PDY0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc85bQ6PDY0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc85bQ6PDY0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc85bQ6PDY0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc85bQ6PDY0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc85bQ6PDY0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc85bQ6PDY0 Gm7290-201ENSMUST00000104990 617 ntBASIC20.47■□□□□ 0.87
Ccdc85bQ6PDY0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc85bQ6PDY0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.47■□□□□ 0.87
Ccdc85bQ6PDY0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.47■□□□□ 0.87
Ccdc85bQ6PDY0 Gm12918-201ENSMUST00000120234 636 ntBASIC20.47■□□□□ 0.87
Ccdc85bQ6PDY0 Gm15710-201ENSMUST00000121821 636 ntBASIC20.47■□□□□ 0.87
Ccdc85bQ6PDY0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms