Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Krt42Q6IFX2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.27■□□□□ 0.84
Krt42Q6IFX2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Krt42Q6IFX2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Krt42Q6IFX2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.83
Krt42Q6IFX2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.26■□□□□ 0.83
Krt42Q6IFX2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Krt42Q6IFX2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.25■□□□□ 0.83
Krt42Q6IFX2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.25■□□□□ 0.83
Krt42Q6IFX2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt42Q6IFX2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt42Q6IFX2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt42Q6IFX2 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.25■□□□□ 0.83
Krt42Q6IFX2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt42Q6IFX2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt42Q6IFX2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Krt42Q6IFX2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt42Q6IFX2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt42Q6IFX2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt42Q6IFX2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Krt42Q6IFX2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Krt42Q6IFX2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Krt42Q6IFX2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt42Q6IFX2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt42Q6IFX2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt42Q6IFX2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt42Q6IFX2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.21■□□□□ 0.83
Krt42Q6IFX2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt42Q6IFX2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt42Q6IFX2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt42Q6IFX2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt42Q6IFX2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.2■□□□□ 0.82
Krt42Q6IFX2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt42Q6IFX2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Krt42Q6IFX2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Krt42Q6IFX2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt42Q6IFX2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Krt42Q6IFX2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Krt42Q6IFX2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt42Q6IFX2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt42Q6IFX2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt42Q6IFX2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt42Q6IFX2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.18■□□□□ 0.82
Krt42Q6IFX2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms