Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pds5aQ6A026 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pds5aQ6A026 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pds5aQ6A026 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Pds5aQ6A026 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pds5aQ6A026 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.29■■□□□ 1
Pds5aQ6A026 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pds5aQ6A026 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pds5aQ6A026 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.29■■□□□ 1
Pds5aQ6A026 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pds5aQ6A026 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.29■■□□□ 1
Pds5aQ6A026 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pds5aQ6A026 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pds5aQ6A026 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.28■■□□□ 1
Pds5aQ6A026 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Pds5aQ6A026 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pds5aQ6A026 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Pds5aQ6A026 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pds5aQ6A026 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pds5aQ6A026 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pds5aQ6A026 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.27■■□□□ 1
Pds5aQ6A026 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pds5aQ6A026 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
Pds5aQ6A026 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Pds5aQ6A026 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pds5aQ6A026 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Pds5aQ6A026 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pds5aQ6A026 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Pds5aQ6A026 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Pds5aQ6A026 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pds5aQ6A026 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pds5aQ6A026 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pds5aQ6A026 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.26■□□□□ 0.99
Pds5aQ6A026 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pds5aQ6A026 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pds5aQ6A026 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Pds5aQ6A026 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pds5aQ6A026 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.26■□□□□ 0.99
Pds5aQ6A026 Gm26833-201ENSMUST00000180899 440 ntBASIC21.26■□□□□ 0.99
Pds5aQ6A026 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pds5aQ6A026 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pds5aQ6A026 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.25■□□□□ 0.99
Pds5aQ6A026 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pds5aQ6A026 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pds5aQ6A026 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pds5aQ6A026 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pds5aQ6A026 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pds5aQ6A026 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pds5aQ6A026 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pds5aQ6A026 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.24■□□□□ 0.99
Pds5aQ6A026 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pds5aQ6A026 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pds5aQ6A026 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pds5aQ6A026 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.23■□□□□ 0.99
Pds5aQ6A026 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Gm40848-201ENSMUST00000221998 324 ntBASIC21.23■□□□□ 0.99
Pds5aQ6A026 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pds5aQ6A026 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pds5aQ6A026 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pds5aQ6A026 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pds5aQ6A026 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms