Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.9■□□□□ 0.62
Sdc3Q64519 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc3Q64519 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc3Q64519 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc3Q64519 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc3Q64519 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc3Q64519 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sdc3Q64519 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc3Q64519 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdc3Q64519 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sdc3Q64519 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sdc3Q64519 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc3Q64519 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc3Q64519 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.89■□□□□ 0.61
Sdc3Q64519 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc3Q64519 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.89■□□□□ 0.61
Sdc3Q64519 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc3Q64519 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sdc3Q64519 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Sdc3Q64519 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc3Q64519 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.89■□□□□ 0.61
Sdc3Q64519 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdc3Q64519 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sdc3Q64519 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc3Q64519 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sdc3Q64519 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc3Q64519 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc3Q64519 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Sdc3Q64519 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.88■□□□□ 0.61
Sdc3Q64519 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.88■□□□□ 0.61
Sdc3Q64519 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc3Q64519 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Sdc3Q64519 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc3Q64519 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sdc3Q64519 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc3Q64519 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc3Q64519 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc3Q64519 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdc3Q64519 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc3Q64519 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Sdc3Q64519 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Sdc3Q64519 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Sdc3Q64519 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Sdc3Q64519 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc3Q64519 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc3Q64519 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sdc3Q64519 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sdc3Q64519 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.86■□□□□ 0.61
Sdc3Q64519 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sdc3Q64519 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.86■□□□□ 0.61
Sdc3Q64519 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc3Q64519 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc3Q64519 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Sdc3Q64519 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc3Q64519 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.86■□□□□ 0.61
Sdc3Q64519 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.86■□□□□ 0.61
Sdc3Q64519 Mir6236-201ENSMUST00000184437 123 ntBASIC18.86■□□□□ 0.61
Sdc3Q64519 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sdc3Q64519 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc3Q64519 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sdc3Q64519 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc3Q64519 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc3Q64519 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc3Q64519 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc3Q64519 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc3Q64519 Gm40848-201ENSMUST00000221998 324 ntBASIC18.85■□□□□ 0.61
Sdc3Q64519 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc3Q64519 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sdc3Q64519 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sdc3Q64519 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.85■□□□□ 0.61
Sdc3Q64519 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sdc3Q64519 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.85■□□□□ 0.61
Sdc3Q64519 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sdc3Q64519 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.84■□□□□ 0.61
Sdc3Q64519 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc3Q64519 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc3Q64519 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.84■□□□□ 0.61
Sdc3Q64519 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.84■□□□□ 0.61
Sdc3Q64519 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.84■□□□□ 0.61
Sdc3Q64519 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc3Q64519 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc3Q64519 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc3Q64519 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sdc3Q64519 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sdc3Q64519 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Sdc3Q64519 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sdc3Q64519 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sdc3Q64519 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.83■□□□□ 0.61
Sdc3Q64519 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc3Q64519 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc3Q64519 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc3Q64519 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc3Q64519 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sdc3Q64519 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc3Q64519 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sdc3Q64519 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sdc3Q64519 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc3Q64519 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc3Q64519 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sdc3Q64519 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms