Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tff3Q62395 Gm42569-201ENSMUST00000200539 472 ntBASIC17.12■□□□□ 0.33
Tff3Q62395 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.12■□□□□ 0.33
Tff3Q62395 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tff3Q62395 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.12■□□□□ 0.33
Tff3Q62395 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tff3Q62395 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tff3Q62395 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tff3Q62395 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tff3Q62395 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tff3Q62395 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff3Q62395 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tff3Q62395 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff3Q62395 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff3Q62395 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff3Q62395 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.11■□□□□ 0.33
Tff3Q62395 Gm26571-201ENSMUST00000181399 666 ntBASIC17.11■□□□□ 0.33
Tff3Q62395 Gm42642-201ENSMUST00000200683 355 ntBASIC17.11■□□□□ 0.33
Tff3Q62395 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff3Q62395 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff3Q62395 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tff3Q62395 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.11■□□□□ 0.33
Tff3Q62395 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tff3Q62395 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tff3Q62395 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Tff3Q62395 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff3Q62395 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tff3Q62395 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff3Q62395 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff3Q62395 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Tff3Q62395 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff3Q62395 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tff3Q62395 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Tff3Q62395 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff3Q62395 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tff3Q62395 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff3Q62395 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff3Q62395 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.09■□□□□ 0.33
Tff3Q62395 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff3Q62395 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tff3Q62395 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff3Q62395 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff3Q62395 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff3Q62395 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tff3Q62395 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tff3Q62395 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tff3Q62395 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Tff3Q62395 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.08■□□□□ 0.33
Tff3Q62395 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Tff3Q62395 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.08■□□□□ 0.32
Tff3Q62395 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tff3Q62395 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tff3Q62395 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tff3Q62395 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tff3Q62395 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tff3Q62395 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Tff3Q62395 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tff3Q62395 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tff3Q62395 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tff3Q62395 Gm18671-201ENSMUST00000214826 683 ntBASIC17.07■□□□□ 0.32
Tff3Q62395 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tff3Q62395 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tff3Q62395 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tff3Q62395 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tff3Q62395 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tff3Q62395 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.07■□□□□ 0.32
Tff3Q62395 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tff3Q62395 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tff3Q62395 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tff3Q62395 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tff3Q62395 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.06■□□□□ 0.32
Tff3Q62395 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tff3Q62395 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Tff3Q62395 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.06■□□□□ 0.32
Tff3Q62395 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tff3Q62395 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tff3Q62395 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tff3Q62395 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tff3Q62395 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tff3Q62395 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tff3Q62395 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tff3Q62395 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tff3Q62395 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tff3Q62395 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tff3Q62395 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tff3Q62395 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tff3Q62395 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tff3Q62395 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.05■□□□□ 0.32
Tff3Q62395 Gm29257-201ENSMUST00000186115 639 ntBASIC17.05■□□□□ 0.32
Tff3Q62395 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tff3Q62395 Gm42778-201ENSMUST00000199644 553 ntBASIC17.05■□□□□ 0.32
Tff3Q62395 Gm9988-201ENSMUST00000069786 435 ntBASIC17.05■□□□□ 0.32
Tff3Q62395 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tff3Q62395 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.05■□□□□ 0.32
Tff3Q62395 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tff3Q62395 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tff3Q62395 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tff3Q62395 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tff3Q62395 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.04■□□□□ 0.32
Tff3Q62395 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms