Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Six2Q62232 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six2Q62232 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.11■□□□□ 0.97
Six2Q62232 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Six2Q62232 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six2Q62232 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Six2Q62232 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six2Q62232 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Six2Q62232 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six2Q62232 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six2Q62232 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Six2Q62232 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.1■□□□□ 0.97
Six2Q62232 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six2Q62232 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six2Q62232 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.09■□□□□ 0.97
Six2Q62232 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six2Q62232 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six2Q62232 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six2Q62232 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Six2Q62232 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Six2Q62232 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.08■□□□□ 0.97
Six2Q62232 Gm9847-201ENSMUST00000052528 599 ntBASIC21.08■□□□□ 0.97
Six2Q62232 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Six2Q62232 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.07■□□□□ 0.96
Six2Q62232 Iqck-206ENSMUST00000208658 2891 ntBASIC21.07■□□□□ 0.96
Six2Q62232 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Six2Q62232 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six2Q62232 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Six2Q62232 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Six2Q62232 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.07■□□□□ 0.96
Six2Q62232 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six2Q62232 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six2Q62232 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six2Q62232 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six2Q62232 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 AA386476-201ENSMUST00000098781 1665 ntBASIC21.06■□□□□ 0.96
Six2Q62232 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.06■□□□□ 0.96
Six2Q62232 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.06■□□□□ 0.96
Six2Q62232 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 Gm21956-201ENSMUST00000179946 522 ntBASIC21.06■□□□□ 0.96
Six2Q62232 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six2Q62232 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.05■□□□□ 0.96
Six2Q62232 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Six2Q62232 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Six2Q62232 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Six2Q62232 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.05■□□□□ 0.96
Six2Q62232 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six2Q62232 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.05■□□□□ 0.96
Six2Q62232 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six2Q62232 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Six2Q62232 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Six2Q62232 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six2Q62232 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six2Q62232 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six2Q62232 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Six2Q62232 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six2Q62232 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Six2Q62232 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.04■□□□□ 0.96
Six2Q62232 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Six2Q62232 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Six2Q62232 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.04■□□□□ 0.96
Six2Q62232 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Six2Q62232 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Six2Q62232 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six2Q62232 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six2Q62232 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six2Q62232 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six2Q62232 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six2Q62232 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Six2Q62232 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six2Q62232 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Six2Q62232 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six2Q62232 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Six2Q62232 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Six2Q62232 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six2Q62232 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six2Q62232 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six2Q62232 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.02■□□□□ 0.96
Six2Q62232 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six2Q62232 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Six2Q62232 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Six2Q62232 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Six2Q62232 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Six2Q62232 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Six2Q62232 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Six2Q62232 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Six2Q62232 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.01■□□□□ 0.95
Six2Q62232 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.01■□□□□ 0.95
Six2Q62232 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.01■□□□□ 0.95
Six2Q62232 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.01■□□□□ 0.95
Six2Q62232 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms