Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim21Q62191 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim21Q62191 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim21Q62191 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim21Q62191 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim21Q62191 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim21Q62191 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim21Q62191 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Trim21Q62191 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim21Q62191 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim21Q62191 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim21Q62191 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim21Q62191 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim21Q62191 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim21Q62191 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim21Q62191 Gm22238-201ENSMUST00000175222 88 ntBASIC20.75■□□□□ 0.91
Trim21Q62191 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.75■□□□□ 0.91
Trim21Q62191 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Trim21Q62191 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim21Q62191 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim21Q62191 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Trim21Q62191 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim21Q62191 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim21Q62191 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Trim21Q62191 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim21Q62191 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim21Q62191 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim21Q62191 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim21Q62191 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim21Q62191 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim21Q62191 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim21Q62191 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim21Q62191 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim21Q62191 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim21Q62191 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim21Q62191 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim21Q62191 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim21Q62191 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim21Q62191 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim21Q62191 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
Trim21Q62191 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim21Q62191 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim21Q62191 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.72■□□□□ 0.91
Trim21Q62191 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Trim21Q62191 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
Trim21Q62191 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim21Q62191 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim21Q62191 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim21Q62191 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim21Q62191 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim21Q62191 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim21Q62191 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim21Q62191 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.72■□□□□ 0.91
Trim21Q62191 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.72■□□□□ 0.91
Trim21Q62191 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim21Q62191 Iqck-206ENSMUST00000208658 2891 ntBASIC20.71■□□□□ 0.91
Trim21Q62191 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.7■□□□□ 0.9
Trim21Q62191 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim21Q62191 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trim21Q62191 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim21Q62191 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Trim21Q62191 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Trim21Q62191 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim21Q62191 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.69■□□□□ 0.9
Trim21Q62191 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim21Q62191 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim21Q62191 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim21Q62191 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim21Q62191 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim21Q62191 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim21Q62191 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim21Q62191 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trim21Q62191 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim21Q62191 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Trim21Q62191 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim21Q62191 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim21Q62191 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.69■□□□□ 0.9
Trim21Q62191 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim21Q62191 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim21Q62191 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim21Q62191 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.68■□□□□ 0.9
Trim21Q62191 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Trim21Q62191 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim21Q62191 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim21Q62191 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim21Q62191 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim21Q62191 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim21Q62191 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim21Q62191 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms