Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a4Q60857 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a4Q60857 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a4Q60857 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a4Q60857 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a4Q60857 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Slc6a4Q60857 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a4Q60857 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Slc6a4Q60857 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.27■□□□□ 0.84
Slc6a4Q60857 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Slc6a4Q60857 Gm10493-201ENSMUST00000097270 612 ntBASIC20.27■□□□□ 0.84
Slc6a4Q60857 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Slc6a4Q60857 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a4Q60857 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc6a4Q60857 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc6a4Q60857 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.26■□□□□ 0.83
Slc6a4Q60857 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.26■□□□□ 0.83
Slc6a4Q60857 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
Slc6a4Q60857 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a4Q60857 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a4Q60857 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.26■□□□□ 0.83
Slc6a4Q60857 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a4Q60857 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.25■□□□□ 0.83
Slc6a4Q60857 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a4Q60857 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Slc6a4Q60857 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.24■□□□□ 0.83
Slc6a4Q60857 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a4Q60857 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a4Q60857 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a4Q60857 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a4Q60857 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a4Q60857 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Slc6a4Q60857 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a4Q60857 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a4Q60857 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a4Q60857 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Slc6a4Q60857 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Slc6a4Q60857 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a4Q60857 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc6a4Q60857 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a4Q60857 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Slc6a4Q60857 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a4Q60857 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a4Q60857 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc6a4Q60857 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.22■□□□□ 0.83
Slc6a4Q60857 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.22■□□□□ 0.83
Slc6a4Q60857 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.22■□□□□ 0.83
Slc6a4Q60857 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.22■□□□□ 0.83
Slc6a4Q60857 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a4Q60857 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.22■□□□□ 0.83
Slc6a4Q60857 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a4Q60857 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a4Q60857 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a4Q60857 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a4Q60857 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a4Q60857 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a4Q60857 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.22■□□□□ 0.83
Slc6a4Q60857 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a4Q60857 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a4Q60857 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a4Q60857 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a4Q60857 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.21■□□□□ 0.83
Slc6a4Q60857 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.21■□□□□ 0.83
Slc6a4Q60857 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
Slc6a4Q60857 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Slc6a4Q60857 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a4Q60857 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a4Q60857 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a4Q60857 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.2■□□□□ 0.82
Slc6a4Q60857 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Slc6a4Q60857 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a4Q60857 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a4Q60857 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a4Q60857 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a4Q60857 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms