Protein–RNA interactions for Protein: Q60771

Cldn11, Claudin-11, mousemouse

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn11Q60771 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn11Q60771 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn11Q60771 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Cldn11Q60771 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cldn11Q60771 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn11Q60771 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn11Q60771 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cldn11Q60771 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn11Q60771 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn11Q60771 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cldn11Q60771 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn11Q60771 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn11Q60771 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cldn11Q60771 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn11Q60771 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn11Q60771 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Cldn11Q60771 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn11Q60771 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Cldn11Q60771 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.48■□□□□ 0.87
Cldn11Q60771 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Cldn11Q60771 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn11Q60771 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.48■□□□□ 0.87
Cldn11Q60771 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn11Q60771 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cldn11Q60771 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn11Q60771 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn11Q60771 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn11Q60771 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn11Q60771 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cldn11Q60771 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn11Q60771 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn11Q60771 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn11Q60771 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cldn11Q60771 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn11Q60771 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.47■□□□□ 0.87
Cldn11Q60771 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn11Q60771 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.46■□□□□ 0.87
Cldn11Q60771 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cldn11Q60771 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.46■□□□□ 0.87
Cldn11Q60771 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.46■□□□□ 0.87
Cldn11Q60771 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn11Q60771 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cldn11Q60771 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn11Q60771 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn11Q60771 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn11Q60771 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn11Q60771 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn11Q60771 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn11Q60771 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn11Q60771 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.45■□□□□ 0.86
Cldn11Q60771 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.45■□□□□ 0.86
Cldn11Q60771 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.45■□□□□ 0.86
Cldn11Q60771 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn11Q60771 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cldn11Q60771 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Cldn11Q60771 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cldn11Q60771 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn11Q60771 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn11Q60771 Gm5874-201ENSMUST00000096101 508 ntBASIC20.44■□□□□ 0.86
Cldn11Q60771 Gm10493-201ENSMUST00000097270 612 ntBASIC20.44■□□□□ 0.86
Cldn11Q60771 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Cldn11Q60771 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn11Q60771 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn11Q60771 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.44■□□□□ 0.86
Cldn11Q60771 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn11Q60771 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn11Q60771 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.43■□□□□ 0.86
Cldn11Q60771 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn11Q60771 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Cldn11Q60771 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.43■□□□□ 0.86
Cldn11Q60771 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Cldn11Q60771 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn11Q60771 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn11Q60771 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cldn11Q60771 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn11Q60771 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn11Q60771 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn11Q60771 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn11Q60771 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn11Q60771 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn11Q60771 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn11Q60771 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.41■□□□□ 0.86
Cldn11Q60771 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn11Q60771 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn11Q60771 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Cldn11Q60771 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.4■□□□□ 0.86
Cldn11Q60771 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn11Q60771 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn11Q60771 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.4■□□□□ 0.86
Cldn11Q60771 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.4■□□□□ 0.86
Cldn11Q60771 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn11Q60771 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn11Q60771 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn11Q60771 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn11Q60771 AA386476-201ENSMUST00000098781 1665 ntBASIC20.4■□□□□ 0.86
Cldn11Q60771 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn11Q60771 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn11Q60771 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn11Q60771 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn11Q60771 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms