Protein–RNA interactions for Protein: Q5TIS6

Noto, Homeobox protein notochord, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NotoQ5TIS6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NotoQ5TIS6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NotoQ5TIS6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.23■□□□□ 0.19
NotoQ5TIS6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.23■□□□□ 0.19
NotoQ5TIS6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
NotoQ5TIS6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NotoQ5TIS6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NotoQ5TIS6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NotoQ5TIS6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NotoQ5TIS6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.22■□□□□ 0.19
NotoQ5TIS6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NotoQ5TIS6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NotoQ5TIS6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
NotoQ5TIS6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NotoQ5TIS6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NotoQ5TIS6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NotoQ5TIS6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NotoQ5TIS6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.21■□□□□ 0.19
NotoQ5TIS6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.21■□□□□ 0.19
NotoQ5TIS6 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.21■□□□□ 0.19
NotoQ5TIS6 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.21■□□□□ 0.19
NotoQ5TIS6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
NotoQ5TIS6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NotoQ5TIS6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NotoQ5TIS6 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.2■□□□□ 0.18
NotoQ5TIS6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
NotoQ5TIS6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NotoQ5TIS6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.2■□□□□ 0.18
NotoQ5TIS6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NotoQ5TIS6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NotoQ5TIS6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.2■□□□□ 0.18
NotoQ5TIS6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NotoQ5TIS6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NotoQ5TIS6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.2■□□□□ 0.18
NotoQ5TIS6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.19■□□□□ 0.18
NotoQ5TIS6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NotoQ5TIS6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Gm45102-201ENSMUST00000207427 857 ntBASIC16.18■□□□□ 0.18
NotoQ5TIS6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NotoQ5TIS6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.17■□□□□ 0.18
NotoQ5TIS6 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.17■□□□□ 0.18
NotoQ5TIS6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NotoQ5TIS6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.17■□□□□ 0.18
NotoQ5TIS6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NotoQ5TIS6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NotoQ5TIS6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NotoQ5TIS6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.17■□□□□ 0.18
NotoQ5TIS6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NotoQ5TIS6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NotoQ5TIS6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NotoQ5TIS6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NotoQ5TIS6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.16■□□□□ 0.18
NotoQ5TIS6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NotoQ5TIS6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NotoQ5TIS6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NotoQ5TIS6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NotoQ5TIS6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NotoQ5TIS6 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.16■□□□□ 0.18
NotoQ5TIS6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NotoQ5TIS6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NotoQ5TIS6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NotoQ5TIS6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NotoQ5TIS6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms