Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim38Q5SZ99 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim38Q5SZ99 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim38Q5SZ99 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim38Q5SZ99 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.44■□□□□ 0.86
Trim38Q5SZ99 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim38Q5SZ99 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim38Q5SZ99 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim38Q5SZ99 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim38Q5SZ99 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim38Q5SZ99 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim38Q5SZ99 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim38Q5SZ99 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim38Q5SZ99 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim38Q5SZ99 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim38Q5SZ99 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim38Q5SZ99 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Trim38Q5SZ99 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim38Q5SZ99 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.42■□□□□ 0.86
Trim38Q5SZ99 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.42■□□□□ 0.86
Trim38Q5SZ99 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim38Q5SZ99 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim38Q5SZ99 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim38Q5SZ99 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.4■□□□□ 0.86
Trim38Q5SZ99 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trim38Q5SZ99 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.4■□□□□ 0.86
Trim38Q5SZ99 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim38Q5SZ99 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim38Q5SZ99 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim38Q5SZ99 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim38Q5SZ99 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim38Q5SZ99 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim38Q5SZ99 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim38Q5SZ99 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim38Q5SZ99 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim38Q5SZ99 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim38Q5SZ99 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Trim38Q5SZ99 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Trim38Q5SZ99 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim38Q5SZ99 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.37■□□□□ 0.85
Trim38Q5SZ99 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.37■□□□□ 0.85
Trim38Q5SZ99 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim38Q5SZ99 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim38Q5SZ99 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim38Q5SZ99 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.36■□□□□ 0.85
Trim38Q5SZ99 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim38Q5SZ99 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim38Q5SZ99 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim38Q5SZ99 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim38Q5SZ99 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim38Q5SZ99 Gm9847-201ENSMUST00000052528 599 ntBASIC20.36■□□□□ 0.85
Trim38Q5SZ99 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trim38Q5SZ99 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim38Q5SZ99 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim38Q5SZ99 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim38Q5SZ99 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim38Q5SZ99 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim38Q5SZ99 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Trim38Q5SZ99 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim38Q5SZ99 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim38Q5SZ99 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim38Q5SZ99 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim38Q5SZ99 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.35■□□□□ 0.85
Trim38Q5SZ99 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim38Q5SZ99 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms