Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3-1Q5R1I8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav3-1Q5R1I8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3-1Q5R1I8 Gm22567-201ENSMUST00000175542 342 ntBASIC13.46□□□□□ -0.25
Trav3-1Q5R1I8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3-1Q5R1I8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3-1Q5R1I8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav3-1Q5R1I8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3-1Q5R1I8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav3-1Q5R1I8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav3-1Q5R1I8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav3-1Q5R1I8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav3-1Q5R1I8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav3-1Q5R1I8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav3-1Q5R1I8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav3-1Q5R1I8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-1Q5R1I8 Gm43403-201ENSMUST00000198011 1786 ntBASIC13.45□□□□□ -0.26
Trav3-1Q5R1I8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-1Q5R1I8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-1Q5R1I8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-1Q5R1I8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-1Q5R1I8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav3-1Q5R1I8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-1Q5R1I8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav3-1Q5R1I8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-1Q5R1I8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-1Q5R1I8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-1Q5R1I8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav3-1Q5R1I8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-1Q5R1I8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-1Q5R1I8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-1Q5R1I8 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms