Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Gm15820-201ENSMUST00000201566 728 ntBASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Gm5812-201ENSMUST00000061073 957 ntBASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clhc1Q5M6W3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.95■□□□□ 0.62
Clhc1Q5M6W3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clhc1Q5M6W3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clhc1Q5M6W3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clhc1Q5M6W3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.95■□□□□ 0.62
Clhc1Q5M6W3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clhc1Q5M6W3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clhc1Q5M6W3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clhc1Q5M6W3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clhc1Q5M6W3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clhc1Q5M6W3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clhc1Q5M6W3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.94■□□□□ 0.62
Clhc1Q5M6W3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clhc1Q5M6W3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clhc1Q5M6W3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clhc1Q5M6W3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clhc1Q5M6W3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clhc1Q5M6W3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
Clhc1Q5M6W3 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.93■□□□□ 0.62
Clhc1Q5M6W3 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.93■□□□□ 0.62
Clhc1Q5M6W3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Clhc1Q5M6W3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clhc1Q5M6W3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clhc1Q5M6W3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clhc1Q5M6W3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clhc1Q5M6W3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clhc1Q5M6W3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clhc1Q5M6W3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.92■□□□□ 0.62
Clhc1Q5M6W3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clhc1Q5M6W3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.92■□□□□ 0.62
Clhc1Q5M6W3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clhc1Q5M6W3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clhc1Q5M6W3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Clhc1Q5M6W3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.91■□□□□ 0.62
Clhc1Q5M6W3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clhc1Q5M6W3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clhc1Q5M6W3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clhc1Q5M6W3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Clhc1Q5M6W3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clhc1Q5M6W3 Gm15546-201ENSMUST00000122095 826 ntBASIC18.91■□□□□ 0.62
Clhc1Q5M6W3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.91■□□□□ 0.62
Clhc1Q5M6W3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Clhc1Q5M6W3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.91■□□□□ 0.62
Clhc1Q5M6W3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clhc1Q5M6W3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clhc1Q5M6W3 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.89■□□□□ 0.62
Clhc1Q5M6W3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clhc1Q5M6W3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.89■□□□□ 0.61
Clhc1Q5M6W3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Clhc1Q5M6W3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Clhc1Q5M6W3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.89■□□□□ 0.61
Clhc1Q5M6W3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.89■□□□□ 0.61
Clhc1Q5M6W3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clhc1Q5M6W3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clhc1Q5M6W3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.88■□□□□ 0.61
Clhc1Q5M6W3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Clhc1Q5M6W3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms