Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.5■■□□□ 1.35
Rnf20Q5DTM8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf20Q5DTM8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf20Q5DTM8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf20Q5DTM8 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.49■■□□□ 1.35
Rnf20Q5DTM8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf20Q5DTM8 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.49■■□□□ 1.35
Rnf20Q5DTM8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Rnf20Q5DTM8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf20Q5DTM8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
Rnf20Q5DTM8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf20Q5DTM8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Rnf20Q5DTM8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rnf20Q5DTM8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf20Q5DTM8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf20Q5DTM8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.48■■□□□ 1.35
Rnf20Q5DTM8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf20Q5DTM8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf20Q5DTM8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.48■■□□□ 1.35
Rnf20Q5DTM8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rnf20Q5DTM8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Rnf20Q5DTM8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.47■■□□□ 1.35
Rnf20Q5DTM8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rnf20Q5DTM8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.47■■□□□ 1.35
Rnf20Q5DTM8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.46■■□□□ 1.35
Rnf20Q5DTM8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rnf20Q5DTM8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rnf20Q5DTM8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Rnf20Q5DTM8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.35
Rnf20Q5DTM8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Rnf20Q5DTM8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.45■■□□□ 1.34
Rnf20Q5DTM8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rnf20Q5DTM8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Rnf20Q5DTM8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.45■■□□□ 1.34
Rnf20Q5DTM8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Rnf20Q5DTM8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Rnf20Q5DTM8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rnf20Q5DTM8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rnf20Q5DTM8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Rnf20Q5DTM8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rnf20Q5DTM8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rnf20Q5DTM8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rnf20Q5DTM8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rnf20Q5DTM8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC23.42■■□□□ 1.34
Rnf20Q5DTM8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf20Q5DTM8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Rnf20Q5DTM8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Rnf20Q5DTM8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
Rnf20Q5DTM8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Rnf20Q5DTM8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf20Q5DTM8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
Rnf20Q5DTM8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rnf20Q5DTM8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.42■■□□□ 1.34
Rnf20Q5DTM8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rnf20Q5DTM8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rnf20Q5DTM8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rnf20Q5DTM8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf20Q5DTM8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf20Q5DTM8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
Rnf20Q5DTM8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf20Q5DTM8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.4■■□□□ 1.34
Rnf20Q5DTM8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf20Q5DTM8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Rnf20Q5DTM8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf20Q5DTM8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rnf20Q5DTM8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rnf20Q5DTM8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rnf20Q5DTM8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.39■■□□□ 1.34
Rnf20Q5DTM8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Rnf20Q5DTM8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Rnf20Q5DTM8 Gm13241-201ENSMUST00000094493 780 ntBASIC23.39■■□□□ 1.33
Rnf20Q5DTM8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rnf20Q5DTM8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rnf20Q5DTM8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf20Q5DTM8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf20Q5DTM8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf20Q5DTM8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Rnf20Q5DTM8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf20Q5DTM8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.38■■□□□ 1.33
Rnf20Q5DTM8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf20Q5DTM8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf20Q5DTM8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf20Q5DTM8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf20Q5DTM8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf20Q5DTM8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf20Q5DTM8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf20Q5DTM8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf20Q5DTM8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf20Q5DTM8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms