Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Bdp1Q571C7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.38■□□□□ 0.85
Bdp1Q571C7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Bdp1Q571C7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Bdp1Q571C7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Bdp1Q571C7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.38■□□□□ 0.85
Bdp1Q571C7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.38■□□□□ 0.85
Bdp1Q571C7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Bdp1Q571C7 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.38■□□□□ 0.85
Bdp1Q571C7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Bdp1Q571C7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Bdp1Q571C7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Bdp1Q571C7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Bdp1Q571C7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Bdp1Q571C7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Bdp1Q571C7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Bdp1Q571C7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Bdp1Q571C7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Bdp1Q571C7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Bdp1Q571C7 Gm21362-201ENSMUST00000194272 928 ntBASIC20.36■□□□□ 0.85
Bdp1Q571C7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Bdp1Q571C7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Bdp1Q571C7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Bdp1Q571C7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Bdp1Q571C7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.36■□□□□ 0.85
Bdp1Q571C7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Bdp1Q571C7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Bdp1Q571C7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Bdp1Q571C7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Bdp1Q571C7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Bdp1Q571C7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Bdp1Q571C7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Bdp1Q571C7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Bdp1Q571C7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Bdp1Q571C7 Gm13534-201ENSMUST00000121169 513 ntBASIC20.35■□□□□ 0.85
Bdp1Q571C7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.35■□□□□ 0.85
Bdp1Q571C7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Bdp1Q571C7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Bdp1Q571C7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Bdp1Q571C7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Bdp1Q571C7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Bdp1Q571C7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Bdp1Q571C7 Dio3-201ENSMUST00000097228 1449 ntBASIC20.34■□□□□ 0.85
Bdp1Q571C7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Bdp1Q571C7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Bdp1Q571C7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Bdp1Q571C7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.33■□□□□ 0.85
Bdp1Q571C7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Bdp1Q571C7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Bdp1Q571C7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Bdp1Q571C7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Bdp1Q571C7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Bdp1Q571C7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Bdp1Q571C7 Gm11249-201ENSMUST00000117071 859 ntBASIC20.33■□□□□ 0.84
Bdp1Q571C7 Gm6433-201ENSMUST00000118634 875 ntBASIC20.33■□□□□ 0.84
Bdp1Q571C7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.33■□□□□ 0.84
Bdp1Q571C7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.33■□□□□ 0.84
Bdp1Q571C7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Bdp1Q571C7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Bdp1Q571C7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Bdp1Q571C7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Bdp1Q571C7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Bdp1Q571C7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Bdp1Q571C7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Bdp1Q571C7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Bdp1Q571C7 Gm10231-201ENSMUST00000181584 441 ntBASIC20.32■□□□□ 0.84
Bdp1Q571C7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Bdp1Q571C7 Gm10175-202ENSMUST00000208752 441 ntBASIC20.32■□□□□ 0.84
Bdp1Q571C7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Bdp1Q571C7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Bdp1Q571C7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Bdp1Q571C7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Gm18101-201ENSMUST00000215769 548 ntBASIC20.31■□□□□ 0.84
Bdp1Q571C7 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.31■□□□□ 0.84
Bdp1Q571C7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.31■□□□□ 0.84
Bdp1Q571C7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Bdp1Q571C7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.3■□□□□ 0.84
Bdp1Q571C7 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.3■□□□□ 0.84
Bdp1Q571C7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Bdp1Q571C7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Bdp1Q571C7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Bdp1Q571C7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Bdp1Q571C7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Bdp1Q571C7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.3■□□□□ 0.84
Bdp1Q571C7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Bdp1Q571C7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.3■□□□□ 0.84
Bdp1Q571C7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Bdp1Q571C7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Bdp1Q571C7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Bdp1Q571C7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms