Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Syne3Q4FZC9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Syne3Q4FZC9 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.89■□□□□ 0.93
Syne3Q4FZC9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.89■□□□□ 0.93
Syne3Q4FZC9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syne3Q4FZC9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.89■□□□□ 0.93
Syne3Q4FZC9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syne3Q4FZC9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syne3Q4FZC9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syne3Q4FZC9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Syne3Q4FZC9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.89■□□□□ 0.93
Syne3Q4FZC9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Syne3Q4FZC9 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.87■□□□□ 0.93
Syne3Q4FZC9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syne3Q4FZC9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syne3Q4FZC9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Syne3Q4FZC9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Syne3Q4FZC9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.87■□□□□ 0.93
Syne3Q4FZC9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Syne3Q4FZC9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syne3Q4FZC9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Syne3Q4FZC9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syne3Q4FZC9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syne3Q4FZC9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.86■□□□□ 0.93
Syne3Q4FZC9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syne3Q4FZC9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Syne3Q4FZC9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne3Q4FZC9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne3Q4FZC9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Syne3Q4FZC9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne3Q4FZC9 Gm21956-201ENSMUST00000179946 522 ntBASIC20.85■□□□□ 0.93
Syne3Q4FZC9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne3Q4FZC9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.85■□□□□ 0.93
Syne3Q4FZC9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Syne3Q4FZC9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syne3Q4FZC9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syne3Q4FZC9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syne3Q4FZC9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Syne3Q4FZC9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syne3Q4FZC9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syne3Q4FZC9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syne3Q4FZC9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Syne3Q4FZC9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Syne3Q4FZC9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.83■□□□□ 0.93
Syne3Q4FZC9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Syne3Q4FZC9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Syne3Q4FZC9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Syne3Q4FZC9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Syne3Q4FZC9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Syne3Q4FZC9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
Syne3Q4FZC9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.83■□□□□ 0.93
Syne3Q4FZC9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Syne3Q4FZC9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Syne3Q4FZC9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Syne3Q4FZC9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Syne3Q4FZC9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syne3Q4FZC9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syne3Q4FZC9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Syne3Q4FZC9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.82■□□□□ 0.92
Syne3Q4FZC9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syne3Q4FZC9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.82■□□□□ 0.92
Syne3Q4FZC9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Syne3Q4FZC9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Syne3Q4FZC9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Syne3Q4FZC9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Gm12821-201ENSMUST00000120022 600 ntBASIC20.81■□□□□ 0.92
Syne3Q4FZC9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Syne3Q4FZC9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Syne3Q4FZC9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Syne3Q4FZC9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syne3Q4FZC9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syne3Q4FZC9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syne3Q4FZC9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Syne3Q4FZC9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Syne3Q4FZC9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms