Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim80Q3V061 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim80Q3V061 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim80Q3V061 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim80Q3V061 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim80Q3V061 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim80Q3V061 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trim80Q3V061 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim80Q3V061 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Trim80Q3V061 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim80Q3V061 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim80Q3V061 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim80Q3V061 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim80Q3V061 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.21■□□□□ 0.83
Trim80Q3V061 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim80Q3V061 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim80Q3V061 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim80Q3V061 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim80Q3V061 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim80Q3V061 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim80Q3V061 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.2■□□□□ 0.82
Trim80Q3V061 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim80Q3V061 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim80Q3V061 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim80Q3V061 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trim80Q3V061 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Trim80Q3V061 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim80Q3V061 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim80Q3V061 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trim80Q3V061 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim80Q3V061 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim80Q3V061 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim80Q3V061 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim80Q3V061 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.19■□□□□ 0.82
Trim80Q3V061 Gm40881-201ENSMUST00000223397 166 ntBASIC20.19■□□□□ 0.82
Trim80Q3V061 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim80Q3V061 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim80Q3V061 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim80Q3V061 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim80Q3V061 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim80Q3V061 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim80Q3V061 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim80Q3V061 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim80Q3V061 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim80Q3V061 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim80Q3V061 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim80Q3V061 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim80Q3V061 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
Trim80Q3V061 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim80Q3V061 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim80Q3V061 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim80Q3V061 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim80Q3V061 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim80Q3V061 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim80Q3V061 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trim80Q3V061 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim80Q3V061 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim80Q3V061 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trim80Q3V061 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim80Q3V061 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim80Q3V061 Gm22238-201ENSMUST00000175222 88 ntBASIC20.16■□□□□ 0.82
Trim80Q3V061 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim80Q3V061 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim80Q3V061 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.16■□□□□ 0.82
Trim80Q3V061 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.16■□□□□ 0.82
Trim80Q3V061 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trim80Q3V061 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim80Q3V061 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim80Q3V061 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim80Q3V061 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim80Q3V061 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim80Q3V061 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim80Q3V061 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim80Q3V061 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.15■□□□□ 0.82
Trim80Q3V061 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trim80Q3V061 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim80Q3V061 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim80Q3V061 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim80Q3V061 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim80Q3V061 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim80Q3V061 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim80Q3V061 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim80Q3V061 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim80Q3V061 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim80Q3V061 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim80Q3V061 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Trim80Q3V061 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim80Q3V061 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim80Q3V061 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim80Q3V061 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim80Q3V061 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim80Q3V061 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.13■□□□□ 0.81
Trim80Q3V061 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim80Q3V061 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim80Q3V061 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim80Q3V061 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.13■□□□□ 0.81
Trim80Q3V061 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trim80Q3V061 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim80Q3V061 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim80Q3V061 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 132.6 ms