Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pfdn4Q3UWL8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn4Q3UWL8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn4Q3UWL8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.25■□□□□ 0.67
Pfdn4Q3UWL8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn4Q3UWL8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn4Q3UWL8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pfdn4Q3UWL8 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.25■□□□□ 0.67
Pfdn4Q3UWL8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn4Q3UWL8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn4Q3UWL8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn4Q3UWL8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn4Q3UWL8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pfdn4Q3UWL8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Pfdn4Q3UWL8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pfdn4Q3UWL8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn4Q3UWL8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn4Q3UWL8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn4Q3UWL8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.24■□□□□ 0.67
Pfdn4Q3UWL8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn4Q3UWL8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pfdn4Q3UWL8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn4Q3UWL8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn4Q3UWL8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn4Q3UWL8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.22■□□□□ 0.67
Pfdn4Q3UWL8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn4Q3UWL8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn4Q3UWL8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn4Q3UWL8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn4Q3UWL8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn4Q3UWL8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn4Q3UWL8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn4Q3UWL8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn4Q3UWL8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn4Q3UWL8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn4Q3UWL8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.2■□□□□ 0.66
Pfdn4Q3UWL8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn4Q3UWL8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn4Q3UWL8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pfdn4Q3UWL8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn4Q3UWL8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn4Q3UWL8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn4Q3UWL8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn4Q3UWL8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn4Q3UWL8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn4Q3UWL8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pfdn4Q3UWL8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pfdn4Q3UWL8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pfdn4Q3UWL8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pfdn4Q3UWL8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pfdn4Q3UWL8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pfdn4Q3UWL8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pfdn4Q3UWL8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn4Q3UWL8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn4Q3UWL8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn4Q3UWL8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pfdn4Q3UWL8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pfdn4Q3UWL8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.16■□□□□ 0.66
Pfdn4Q3UWL8 Mir6236-201ENSMUST00000184437 123 ntBASIC19.16■□□□□ 0.66
Pfdn4Q3UWL8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pfdn4Q3UWL8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn4Q3UWL8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn4Q3UWL8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms