Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Naf1Q3UMQ8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Naf1Q3UMQ8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Naf1Q3UMQ8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Naf1Q3UMQ8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Naf1Q3UMQ8 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.08■□□□□ 0.81
Naf1Q3UMQ8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Naf1Q3UMQ8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Naf1Q3UMQ8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Naf1Q3UMQ8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Naf1Q3UMQ8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Naf1Q3UMQ8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Naf1Q3UMQ8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Naf1Q3UMQ8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.07■□□□□ 0.8
Naf1Q3UMQ8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.07■□□□□ 0.8
Naf1Q3UMQ8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Naf1Q3UMQ8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
Naf1Q3UMQ8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.06■□□□□ 0.8
Naf1Q3UMQ8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Naf1Q3UMQ8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Naf1Q3UMQ8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Naf1Q3UMQ8 Gm26571-201ENSMUST00000181399 666 ntBASIC20.05■□□□□ 0.8
Naf1Q3UMQ8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.05■□□□□ 0.8
Naf1Q3UMQ8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Naf1Q3UMQ8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Naf1Q3UMQ8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Naf1Q3UMQ8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.05■□□□□ 0.8
Naf1Q3UMQ8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Naf1Q3UMQ8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Naf1Q3UMQ8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Naf1Q3UMQ8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Naf1Q3UMQ8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Naf1Q3UMQ8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Naf1Q3UMQ8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Naf1Q3UMQ8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Naf1Q3UMQ8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Naf1Q3UMQ8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Naf1Q3UMQ8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Naf1Q3UMQ8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Naf1Q3UMQ8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Naf1Q3UMQ8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Naf1Q3UMQ8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Naf1Q3UMQ8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Naf1Q3UMQ8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Naf1Q3UMQ8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Naf1Q3UMQ8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Naf1Q3UMQ8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Naf1Q3UMQ8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Naf1Q3UMQ8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Naf1Q3UMQ8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Naf1Q3UMQ8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.01■□□□□ 0.79
Naf1Q3UMQ8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Naf1Q3UMQ8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Naf1Q3UMQ8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Naf1Q3UMQ8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Naf1Q3UMQ8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Naf1Q3UMQ8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Naf1Q3UMQ8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Naf1Q3UMQ8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20■□□□□ 0.79
Naf1Q3UMQ8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Naf1Q3UMQ8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20■□□□□ 0.79
Naf1Q3UMQ8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Naf1Q3UMQ8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20■□□□□ 0.79
Naf1Q3UMQ8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Naf1Q3UMQ8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Naf1Q3UMQ8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Naf1Q3UMQ8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Naf1Q3UMQ8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Naf1Q3UMQ8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Naf1Q3UMQ8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Naf1Q3UMQ8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Naf1Q3UMQ8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Naf1Q3UMQ8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms