Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
Col5a2Q3U962 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col5a2Q3U962 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col5a2Q3U962 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col5a2Q3U962 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Col5a2Q3U962 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col5a2Q3U962 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col5a2Q3U962 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col5a2Q3U962 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Col5a2Q3U962 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col5a2Q3U962 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Col5a2Q3U962 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Col5a2Q3U962 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col5a2Q3U962 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col5a2Q3U962 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col5a2Q3U962 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col5a2Q3U962 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Col5a2Q3U962 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col5a2Q3U962 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col5a2Q3U962 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col5a2Q3U962 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col5a2Q3U962 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col5a2Q3U962 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC23.79■■□□□ 1.4
Col5a2Q3U962 Gm13534-201ENSMUST00000121169 513 ntBASIC23.79■■□□□ 1.4
Col5a2Q3U962 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Col5a2Q3U962 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Col5a2Q3U962 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Col5a2Q3U962 Gm10812-201ENSMUST00000099864 546 ntBASIC23.78■■□□□ 1.4
Col5a2Q3U962 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col5a2Q3U962 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Col5a2Q3U962 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col5a2Q3U962 Gm13181-201ENSMUST00000120117 1069 ntBASIC23.77■■□□□ 1.4
Col5a2Q3U962 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.77■■□□□ 1.4
Col5a2Q3U962 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col5a2Q3U962 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col5a2Q3U962 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.39
Col5a2Q3U962 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col5a2Q3U962 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.76■■□□□ 1.39
Col5a2Q3U962 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.76■■□□□ 1.39
Col5a2Q3U962 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Col5a2Q3U962 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col5a2Q3U962 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.76■■□□□ 1.39
Col5a2Q3U962 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.76■■□□□ 1.39
Col5a2Q3U962 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col5a2Q3U962 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Col5a2Q3U962 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col5a2Q3U962 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC23.75■■□□□ 1.39
Col5a2Q3U962 Gm44878-201ENSMUST00000205812 1295 ntBASIC23.75■■□□□ 1.39
Col5a2Q3U962 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col5a2Q3U962 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Col5a2Q3U962 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col5a2Q3U962 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col5a2Q3U962 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col5a2Q3U962 Gm6365-201ENSMUST00000054711 744 ntBASIC23.75■■□□□ 1.39
Col5a2Q3U962 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.75■■□□□ 1.39
Col5a2Q3U962 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col5a2Q3U962 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col5a2Q3U962 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col5a2Q3U962 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col5a2Q3U962 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col5a2Q3U962 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.73■■□□□ 1.39
Col5a2Q3U962 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col5a2Q3U962 Trmt13-210ENSMUST00000198454 880 ntBASIC23.72■■□□□ 1.39
Col5a2Q3U962 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col5a2Q3U962 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.72■■□□□ 1.39
Col5a2Q3U962 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col5a2Q3U962 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col5a2Q3U962 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Col5a2Q3U962 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col5a2Q3U962 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col5a2Q3U962 AC135963.1-201ENSMUST00000211640 717 ntBASIC23.71■■□□□ 1.39
Col5a2Q3U962 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Col5a2Q3U962 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.71■■□□□ 1.39
Col5a2Q3U962 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.7■■□□□ 1.39
Col5a2Q3U962 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Col5a2Q3U962 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.7■■□□□ 1.38
Col5a2Q3U962 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Col5a2Q3U962 Gm6420-201ENSMUST00000193885 723 ntBASIC23.7■■□□□ 1.38
Col5a2Q3U962 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col5a2Q3U962 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col5a2Q3U962 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col5a2Q3U962 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Col5a2Q3U962 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col5a2Q3U962 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col5a2Q3U962 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col5a2Q3U962 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col5a2Q3U962 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col5a2Q3U962 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.69■■□□□ 1.38
Col5a2Q3U962 Gm38205-201ENSMUST00000192243 258 ntBASIC23.69■■□□□ 1.38
Col5a2Q3U962 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC23.69■■□□□ 1.38
Col5a2Q3U962 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC23.69■■□□□ 1.38
Col5a2Q3U962 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col5a2Q3U962 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col5a2Q3U962 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col5a2Q3U962 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col5a2Q3U962 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col5a2Q3U962 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col5a2Q3U962 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col5a2Q3U962 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col5a2Q3U962 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms