Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc4Q3TCX3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc4Q3TCX3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc4Q3TCX3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.7■□□□□ 0.58
Khdc4Q3TCX3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc4Q3TCX3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc4Q3TCX3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
Khdc4Q3TCX3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc4Q3TCX3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc4Q3TCX3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc4Q3TCX3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc4Q3TCX3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Khdc4Q3TCX3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc4Q3TCX3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc4Q3TCX3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Khdc4Q3TCX3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc4Q3TCX3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc4Q3TCX3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc4Q3TCX3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Khdc4Q3TCX3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc4Q3TCX3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc4Q3TCX3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc4Q3TCX3 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.69■□□□□ 0.58
Khdc4Q3TCX3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Khdc4Q3TCX3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.68■□□□□ 0.58
Khdc4Q3TCX3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc4Q3TCX3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Khdc4Q3TCX3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Khdc4Q3TCX3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc4Q3TCX3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc4Q3TCX3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc4Q3TCX3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc4Q3TCX3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc4Q3TCX3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Khdc4Q3TCX3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Khdc4Q3TCX3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc4Q3TCX3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Khdc4Q3TCX3 Gm43060-201ENSMUST00000200621 289 ntBASIC18.66■□□□□ 0.58
Khdc4Q3TCX3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc4Q3TCX3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Khdc4Q3TCX3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Gm29257-201ENSMUST00000186115 639 ntBASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc4Q3TCX3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Khdc4Q3TCX3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Khdc4Q3TCX3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc4Q3TCX3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc4Q3TCX3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc4Q3TCX3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc4Q3TCX3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc4Q3TCX3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc4Q3TCX3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc4Q3TCX3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Khdc4Q3TCX3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Khdc4Q3TCX3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.63■□□□□ 0.57
Khdc4Q3TCX3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc4Q3TCX3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.63■□□□□ 0.57
Khdc4Q3TCX3 Gm40848-201ENSMUST00000221998 324 ntBASIC18.63■□□□□ 0.57
Khdc4Q3TCX3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc4Q3TCX3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc4Q3TCX3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Khdc4Q3TCX3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc4Q3TCX3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Khdc4Q3TCX3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Khdc4Q3TCX3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms