Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Shroom4Q1W617 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC31.8■■■□□ 2.68
Shroom4Q1W617 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Shroom4Q1W617 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC31.8■■■□□ 2.68
Shroom4Q1W617 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Shroom4Q1W617 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Shroom4Q1W617 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
Shroom4Q1W617 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Shroom4Q1W617 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC31.79■■■□□ 2.68
Shroom4Q1W617 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Shroom4Q1W617 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC31.79■■■□□ 2.68
Shroom4Q1W617 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Shroom4Q1W617 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC31.78■■■□□ 2.68
Shroom4Q1W617 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Shroom4Q1W617 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Shroom4Q1W617 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Shroom4Q1W617 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Shroom4Q1W617 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Shroom4Q1W617 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Shroom4Q1W617 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Shroom4Q1W617 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC31.77■■■□□ 2.68
Shroom4Q1W617 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
Shroom4Q1W617 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Shroom4Q1W617 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Shroom4Q1W617 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC31.76■■■□□ 2.67
Shroom4Q1W617 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
Shroom4Q1W617 Gm10655-201ENSMUST00000098658 1397 ntBASIC31.76■■■□□ 2.67
Shroom4Q1W617 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
Shroom4Q1W617 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Shroom4Q1W617 Gm13534-201ENSMUST00000121169 513 ntBASIC31.75■■■□□ 2.67
Shroom4Q1W617 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Shroom4Q1W617 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Shroom4Q1W617 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Shroom4Q1W617 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Shroom4Q1W617 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Shroom4Q1W617 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Shroom4Q1W617 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Shroom4Q1W617 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Shroom4Q1W617 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
Shroom4Q1W617 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Shroom4Q1W617 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC31.73■■■□□ 2.67
Shroom4Q1W617 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Shroom4Q1W617 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC31.72■■■□□ 2.67
Shroom4Q1W617 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom4Q1W617 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC31.72■■■□□ 2.67
Shroom4Q1W617 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom4Q1W617 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom4Q1W617 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom4Q1W617 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom4Q1W617 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom4Q1W617 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom4Q1W617 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
Shroom4Q1W617 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC31.72■■■□□ 2.67
Shroom4Q1W617 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Shroom4Q1W617 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
Shroom4Q1W617 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC31.71■■■□□ 2.67
Shroom4Q1W617 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Shroom4Q1W617 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
Shroom4Q1W617 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Shroom4Q1W617 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC31.7■■■□□ 2.67
Shroom4Q1W617 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Shroom4Q1W617 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Shroom4Q1W617 Gm7290-201ENSMUST00000104990 617 ntBASIC31.69■■■□□ 2.66
Shroom4Q1W617 Gm12918-201ENSMUST00000120234 636 ntBASIC31.69■■■□□ 2.66
Shroom4Q1W617 Gm15710-201ENSMUST00000121821 636 ntBASIC31.69■■■□□ 2.66
Shroom4Q1W617 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC31.69■■■□□ 2.66
Shroom4Q1W617 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Shroom4Q1W617 Gm5075-201ENSMUST00000196916 622 ntBASIC31.69■■■□□ 2.66
Shroom4Q1W617 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
Shroom4Q1W617 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC31.69■■■□□ 2.66
Shroom4Q1W617 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC31.69■■■□□ 2.66
Shroom4Q1W617 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Shroom4Q1W617 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Shroom4Q1W617 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Shroom4Q1W617 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC31.68■■■□□ 2.66
Shroom4Q1W617 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Shroom4Q1W617 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Shroom4Q1W617 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Shroom4Q1W617 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Shroom4Q1W617 Gm6211-202ENSMUST00000167849 925 ntBASIC31.67■■■□□ 2.66
Shroom4Q1W617 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC31.67■■■□□ 2.66
Shroom4Q1W617 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Shroom4Q1W617 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Shroom4Q1W617 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Shroom4Q1W617 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Shroom4Q1W617 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
Shroom4Q1W617 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Shroom4Q1W617 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC31.65■■■□□ 2.66
Shroom4Q1W617 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Shroom4Q1W617 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Shroom4Q1W617 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Shroom4Q1W617 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Shroom4Q1W617 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC31.65■■■□□ 2.66
Shroom4Q1W617 Gm26524-201ENSMUST00000192339 390 ntBASIC31.65■■■□□ 2.66
Shroom4Q1W617 Gm6420-201ENSMUST00000193885 723 ntBASIC31.65■■■□□ 2.66
Shroom4Q1W617 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.66
Shroom4Q1W617 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC31.64■■■□□ 2.66
Shroom4Q1W617 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Shroom4Q1W617 Gm20760-201ENSMUST00000179197 648 ntBASIC31.64■■■□□ 2.66
Shroom4Q1W617 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms