Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.32■□□□□ 0.2
Tff1Q08423 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.32■□□□□ 0.2
Tff1Q08423 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tff1Q08423 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tff1Q08423 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tff1Q08423 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tff1Q08423 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Tff1Q08423 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tff1Q08423 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tff1Q08423 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tff1Q08423 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.31■□□□□ 0.2
Tff1Q08423 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tff1Q08423 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.31■□□□□ 0.2
Tff1Q08423 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tff1Q08423 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tff1Q08423 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tff1Q08423 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tff1Q08423 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tff1Q08423 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tff1Q08423 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.3■□□□□ 0.2
Tff1Q08423 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.3■□□□□ 0.2
Tff1Q08423 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tff1Q08423 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tff1Q08423 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tff1Q08423 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tff1Q08423 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tff1Q08423 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Tff1Q08423 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tff1Q08423 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tff1Q08423 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tff1Q08423 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tff1Q08423 Gm12821-201ENSMUST00000120022 600 ntBASIC16.29■□□□□ 0.2
Tff1Q08423 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tff1Q08423 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Tff1Q08423 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tff1Q08423 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tff1Q08423 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tff1Q08423 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tff1Q08423 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tff1Q08423 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.28■□□□□ 0.2
Tff1Q08423 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.28■□□□□ 0.2
Tff1Q08423 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tff1Q08423 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tff1Q08423 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tff1Q08423 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Tff1Q08423 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Tff1Q08423 Gm12922-201ENSMUST00000120626 809 ntBASIC16.27■□□□□ 0.2
Tff1Q08423 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Tff1Q08423 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tff1Q08423 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tff1Q08423 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tff1Q08423 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.27■□□□□ 0.19
Tff1Q08423 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Tff1Q08423 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tff1Q08423 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tff1Q08423 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tff1Q08423 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tff1Q08423 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.26■□□□□ 0.19
Tff1Q08423 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.26■□□□□ 0.19
Tff1Q08423 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.26■□□□□ 0.19
Tff1Q08423 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tff1Q08423 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tff1Q08423 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Tff1Q08423 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tff1Q08423 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tff1Q08423 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tff1Q08423 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tff1Q08423 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tff1Q08423 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tff1Q08423 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tff1Q08423 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tff1Q08423 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tff1Q08423 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Tff1Q08423 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tff1Q08423 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tff1Q08423 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tff1Q08423 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Tff1Q08423 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tff1Q08423 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.25■□□□□ 0.19
Tff1Q08423 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tff1Q08423 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.25■□□□□ 0.19
Tff1Q08423 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Tff1Q08423 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.25■□□□□ 0.19
Tff1Q08423 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tff1Q08423 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.24■□□□□ 0.19
Tff1Q08423 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tff1Q08423 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms