Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a2Q02788 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a2Q02788 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Col6a2Q02788 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a2Q02788 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a2Q02788 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a2Q02788 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Col6a2Q02788 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Col6a2Q02788 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a2Q02788 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a2Q02788 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a2Q02788 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.7■□□□□ 0.74
Col6a2Q02788 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a2Q02788 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.7■□□□□ 0.74
Col6a2Q02788 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a2Q02788 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a2Q02788 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.7■□□□□ 0.74
Col6a2Q02788 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a2Q02788 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a2Q02788 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a2Q02788 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Col6a2Q02788 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a2Q02788 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a2Q02788 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a2Q02788 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.69■□□□□ 0.74
Col6a2Q02788 Gm5874-201ENSMUST00000096101 508 ntBASIC19.69■□□□□ 0.74
Col6a2Q02788 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a2Q02788 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Col6a2Q02788 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Col6a2Q02788 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a2Q02788 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a2Q02788 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Col6a2Q02788 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col6a2Q02788 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a2Q02788 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a2Q02788 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a2Q02788 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.68■□□□□ 0.74
Col6a2Q02788 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.68■□□□□ 0.74
Col6a2Q02788 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Col6a2Q02788 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a2Q02788 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a2Q02788 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a2Q02788 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a2Q02788 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.68■□□□□ 0.74
Col6a2Q02788 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a2Q02788 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a2Q02788 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a2Q02788 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a2Q02788 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a2Q02788 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a2Q02788 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Col6a2Q02788 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a2Q02788 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a2Q02788 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.67■□□□□ 0.74
Col6a2Q02788 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a2Q02788 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Col6a2Q02788 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a2Q02788 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a2Q02788 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col6a2Q02788 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Col6a2Q02788 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a2Q02788 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a2Q02788 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a2Q02788 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col6a2Q02788 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Col6a2Q02788 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a2Q02788 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a2Q02788 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.65■□□□□ 0.74
Col6a2Q02788 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a2Q02788 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a2Q02788 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a2Q02788 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col6a2Q02788 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Col6a2Q02788 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a2Q02788 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Col6a2Q02788 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a2Q02788 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a2Q02788 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a2Q02788 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Col6a2Q02788 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a2Q02788 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a2Q02788 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a2Q02788 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Col6a2Q02788 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a2Q02788 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col6a2Q02788 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col6a2Q02788 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a2Q02788 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a2Q02788 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a2Q02788 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.63■□□□□ 0.73
Col6a2Q02788 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.63■□□□□ 0.73
Col6a2Q02788 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a2Q02788 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.63■□□□□ 0.73
Col6a2Q02788 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.63■□□□□ 0.73
Col6a2Q02788 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.63■□□□□ 0.73
Col6a2Q02788 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a2Q02788 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.62■□□□□ 0.73
Col6a2Q02788 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a2Q02788 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.62■□□□□ 0.73
Col6a2Q02788 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms