Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx3-2P97503 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx3-2P97503 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx3-2P97503 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Nkx3-2P97503 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx3-2P97503 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx3-2P97503 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nkx3-2P97503 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nkx3-2P97503 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Nkx3-2P97503 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx3-2P97503 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx3-2P97503 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx3-2P97503 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx3-2P97503 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx3-2P97503 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx3-2P97503 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.58■□□□□ 0.56
Nkx3-2P97503 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Mir6236-201ENSMUST00000184437 123 ntBASIC18.58■□□□□ 0.56
Nkx3-2P97503 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx3-2P97503 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx3-2P97503 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx3-2P97503 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.57■□□□□ 0.56
Nkx3-2P97503 Smad6-203ENSMUST00000179458 273 ntBASIC18.57■□□□□ 0.56
Nkx3-2P97503 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx3-2P97503 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.57■□□□□ 0.56
Nkx3-2P97503 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx3-2P97503 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx3-2P97503 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.55■□□□□ 0.56
Nkx3-2P97503 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx3-2P97503 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx3-2P97503 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx3-2P97503 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx3-2P97503 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nkx3-2P97503 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nkx3-2P97503 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx3-2P97503 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.54■□□□□ 0.56
Nkx3-2P97503 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx3-2P97503 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.54■□□□□ 0.56
Nkx3-2P97503 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx3-2P97503 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx3-2P97503 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx3-2P97503 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx3-2P97503 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Nkx3-2P97503 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Golph3-202ENSMUST00000226517 2359 ntBASIC18.53■□□□□ 0.56
Nkx3-2P97503 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Gm43060-201ENSMUST00000200621 289 ntBASIC18.53■□□□□ 0.56
Nkx3-2P97503 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.53■□□□□ 0.56
Nkx3-2P97503 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.53■□□□□ 0.56
Nkx3-2P97503 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx3-2P97503 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx3-2P97503 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx3-2P97503 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nkx3-2P97503 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx3-2P97503 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nkx3-2P97503 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx3-2P97503 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nkx3-2P97503 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nkx3-2P97503 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx3-2P97503 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx3-2P97503 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nkx3-2P97503 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx3-2P97503 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx3-2P97503 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx3-2P97503 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx3-2P97503 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx3-2P97503 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx3-2P97503 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms