Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrkdcP97313 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrkdcP97313 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PrkdcP97313 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
PrkdcP97313 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PrkdcP97313 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.84□□□□□ -0.19
PrkdcP97313 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.84□□□□□ -0.19
PrkdcP97313 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrkdcP97313 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PrkdcP97313 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrkdcP97313 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PrkdcP97313 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.84□□□□□ -0.19
PrkdcP97313 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrkdcP97313 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.84□□□□□ -0.19
PrkdcP97313 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PrkdcP97313 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.84□□□□□ -0.19
PrkdcP97313 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.84□□□□□ -0.19
PrkdcP97313 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PrkdcP97313 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrkdcP97313 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrkdcP97313 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PrkdcP97313 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
PrkdcP97313 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PrkdcP97313 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PrkdcP97313 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
PrkdcP97313 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PrkdcP97313 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PrkdcP97313 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrkdcP97313 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PrkdcP97313 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.83□□□□□ -0.2
PrkdcP97313 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrkdcP97313 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrkdcP97313 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrkdcP97313 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PrkdcP97313 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrkdcP97313 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PrkdcP97313 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PrkdcP97313 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.83□□□□□ -0.2
PrkdcP97313 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PrkdcP97313 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PrkdcP97313 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PrkdcP97313 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PrkdcP97313 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.82□□□□□ -0.2
PrkdcP97313 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.82□□□□□ -0.2
PrkdcP97313 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PrkdcP97313 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PrkdcP97313 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PrkdcP97313 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PrkdcP97313 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PrkdcP97313 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.81□□□□□ -0.2
PrkdcP97313 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PrkdcP97313 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PrkdcP97313 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PrkdcP97313 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PrkdcP97313 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PrkdcP97313 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PrkdcP97313 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PrkdcP97313 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.8□□□□□ -0.2
PrkdcP97313 Gm38205-201ENSMUST00000192243 258 ntBASIC13.8□□□□□ -0.2
PrkdcP97313 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.8□□□□□ -0.2
PrkdcP97313 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrkdcP97313 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrkdcP97313 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrkdcP97313 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PrkdcP97313 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.8□□□□□ -0.2
PrkdcP97313 Gm6576-201ENSMUST00000169678 883 ntBASIC13.8□□□□□ -0.2
PrkdcP97313 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.8□□□□□ -0.2
PrkdcP97313 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PrkdcP97313 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrkdcP97313 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PrkdcP97313 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrkdcP97313 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PrkdcP97313 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.79□□□□□ -0.2
PrkdcP97313 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.79□□□□□ -0.2
PrkdcP97313 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.79□□□□□ -0.2
PrkdcP97313 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrkdcP97313 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrkdcP97313 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrkdcP97313 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PrkdcP97313 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrkdcP97313 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrkdcP97313 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrkdcP97313 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrkdcP97313 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrkdcP97313 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PrkdcP97313 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PrkdcP97313 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC13.79□□□□□ -0.2
PrkdcP97313 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PrkdcP97313 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms