Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SgcaP82350 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SgcaP82350 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.45■□□□□ 0.22
SgcaP82350 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
SgcaP82350 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.45■□□□□ 0.22
SgcaP82350 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SgcaP82350 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SgcaP82350 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcaP82350 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcaP82350 Gm27502-201ENSMUST00000183495 199 ntBASIC16.44■□□□□ 0.22
SgcaP82350 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcaP82350 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.44■□□□□ 0.22
SgcaP82350 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcaP82350 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcaP82350 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SgcaP82350 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SgcaP82350 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcaP82350 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcaP82350 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcaP82350 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SgcaP82350 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.44■□□□□ 0.22
SgcaP82350 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SgcaP82350 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcaP82350 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.43■□□□□ 0.22
SgcaP82350 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcaP82350 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SgcaP82350 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.43■□□□□ 0.22
SgcaP82350 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcaP82350 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcaP82350 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcaP82350 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.43■□□□□ 0.22
SgcaP82350 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SgcaP82350 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcaP82350 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcaP82350 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.43■□□□□ 0.22
SgcaP82350 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgcaP82350 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SgcaP82350 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.42■□□□□ 0.22
SgcaP82350 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgcaP82350 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
SgcaP82350 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.42■□□□□ 0.22
SgcaP82350 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcaP82350 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SgcaP82350 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcaP82350 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SgcaP82350 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcaP82350 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SgcaP82350 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcaP82350 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcaP82350 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SgcaP82350 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcaP82350 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcaP82350 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcaP82350 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgcaP82350 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcaP82350 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SgcaP82350 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SgcaP82350 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgcaP82350 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.4■□□□□ 0.22
SgcaP82350 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgcaP82350 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcaP82350 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgcaP82350 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgcaP82350 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgcaP82350 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgcaP82350 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SgcaP82350 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcaP82350 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SgcaP82350 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.39■□□□□ 0.21
SgcaP82350 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SgcaP82350 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcaP82350 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcaP82350 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.39■□□□□ 0.21
SgcaP82350 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgcaP82350 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms