Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Crnkl1P63154 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Crnkl1P63154 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Crnkl1P63154 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Crnkl1P63154 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crnkl1P63154 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crnkl1P63154 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.4■□□□□ 0.7
Crnkl1P63154 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Crnkl1P63154 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.4■□□□□ 0.7
Crnkl1P63154 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crnkl1P63154 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.4■□□□□ 0.7
Crnkl1P63154 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Crnkl1P63154 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crnkl1P63154 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crnkl1P63154 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.4■□□□□ 0.7
Crnkl1P63154 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Crnkl1P63154 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Crnkl1P63154 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Crnkl1P63154 Gm13238-201ENSMUST00000117655 780 ntBASIC19.39■□□□□ 0.69
Crnkl1P63154 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Crnkl1P63154 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Crnkl1P63154 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Crnkl1P63154 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Crnkl1P63154 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Crnkl1P63154 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Crnkl1P63154 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Crnkl1P63154 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Crnkl1P63154 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Crnkl1P63154 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Crnkl1P63154 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Crnkl1P63154 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.38■□□□□ 0.69
Crnkl1P63154 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.38■□□□□ 0.69
Crnkl1P63154 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crnkl1P63154 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crnkl1P63154 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crnkl1P63154 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crnkl1P63154 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crnkl1P63154 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crnkl1P63154 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crnkl1P63154 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Crnkl1P63154 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.37■□□□□ 0.69
Crnkl1P63154 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Crnkl1P63154 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crnkl1P63154 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Crnkl1P63154 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crnkl1P63154 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Crnkl1P63154 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crnkl1P63154 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crnkl1P63154 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
Crnkl1P63154 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Crnkl1P63154 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Crnkl1P63154 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Crnkl1P63154 Gm5812-201ENSMUST00000061073 957 ntBASIC19.36■□□□□ 0.69
Crnkl1P63154 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Crnkl1P63154 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Crnkl1P63154 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.36■□□□□ 0.69
Crnkl1P63154 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Crnkl1P63154 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Crnkl1P63154 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crnkl1P63154 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crnkl1P63154 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Crnkl1P63154 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crnkl1P63154 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Crnkl1P63154 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Crnkl1P63154 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crnkl1P63154 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crnkl1P63154 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.34■□□□□ 0.69
Crnkl1P63154 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Crnkl1P63154 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.34■□□□□ 0.69
Crnkl1P63154 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Crnkl1P63154 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Crnkl1P63154 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Crnkl1P63154 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crnkl1P63154 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Crnkl1P63154 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crnkl1P63154 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Crnkl1P63154 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Crnkl1P63154 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Crnkl1P63154 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.68
Crnkl1P63154 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crnkl1P63154 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crnkl1P63154 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crnkl1P63154 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Crnkl1P63154 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Crnkl1P63154 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crnkl1P63154 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crnkl1P63154 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Crnkl1P63154 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crnkl1P63154 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crnkl1P63154 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Crnkl1P63154 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Crnkl1P63154 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Crnkl1P63154 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crnkl1P63154 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Crnkl1P63154 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crnkl1P63154 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crnkl1P63154 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Crnkl1P63154 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Crnkl1P63154 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Crnkl1P63154 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms