Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
Lsm6P62313 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
Lsm6P62313 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lsm6P62313 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm6P62313 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm6P62313 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.28■□□□□ 0.36
Lsm6P62313 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm6P62313 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lsm6P62313 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.28■□□□□ 0.36
Lsm6P62313 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.28■□□□□ 0.36
Lsm6P62313 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm6P62313 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm6P62313 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm6P62313 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm6P62313 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm6P62313 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm6P62313 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.27■□□□□ 0.36
Lsm6P62313 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.27■□□□□ 0.36
Lsm6P62313 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm6P62313 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm6P62313 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm6P62313 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lsm6P62313 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Lsm6P62313 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.26■□□□□ 0.35
Lsm6P62313 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.26■□□□□ 0.35
Lsm6P62313 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm6P62313 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm6P62313 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lsm6P62313 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Lsm6P62313 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Lsm6P62313 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm6P62313 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm6P62313 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm6P62313 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm6P62313 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm6P62313 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm6P62313 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm6P62313 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm6P62313 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lsm6P62313 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.24■□□□□ 0.35
Lsm6P62313 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm6P62313 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.24■□□□□ 0.35
Lsm6P62313 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm6P62313 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lsm6P62313 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm6P62313 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm6P62313 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm6P62313 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Lsm6P62313 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm6P62313 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lsm6P62313 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lsm6P62313 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Lsm6P62313 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm6P62313 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm6P62313 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm6P62313 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.22■□□□□ 0.35
Lsm6P62313 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.22■□□□□ 0.35
Lsm6P62313 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.22■□□□□ 0.35
Lsm6P62313 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm6P62313 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm6P62313 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.22■□□□□ 0.35
Lsm6P62313 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.22■□□□□ 0.35
Lsm6P62313 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lsm6P62313 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm6P62313 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lsm6P62313 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Lsm6P62313 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm6P62313 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Lsm6P62313 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm6P62313 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm6P62313 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm6P62313 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm6P62313 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm6P62313 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Lsm6P62313 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm6P62313 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lsm6P62313 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms