Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sem1P60897 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sem1P60897 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sem1P60897 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.78■□□□□ 0.6
Sem1P60897 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.78■□□□□ 0.6
Sem1P60897 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sem1P60897 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sem1P60897 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sem1P60897 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sem1P60897 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sem1P60897 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sem1P60897 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.76■□□□□ 0.59
Sem1P60897 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sem1P60897 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sem1P60897 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sem1P60897 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sem1P60897 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sem1P60897 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sem1P60897 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.76■□□□□ 0.59
Sem1P60897 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sem1P60897 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sem1P60897 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sem1P60897 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.75■□□□□ 0.59
Sem1P60897 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sem1P60897 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sem1P60897 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.75■□□□□ 0.59
Sem1P60897 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sem1P60897 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sem1P60897 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sem1P60897 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sem1P60897 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sem1P60897 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sem1P60897 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.74■□□□□ 0.59
Sem1P60897 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sem1P60897 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sem1P60897 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sem1P60897 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sem1P60897 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sem1P60897 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sem1P60897 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.74■□□□□ 0.59
Sem1P60897 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sem1P60897 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sem1P60897 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sem1P60897 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sem1P60897 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.74■□□□□ 0.59
Sem1P60897 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sem1P60897 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sem1P60897 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sem1P60897 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Sem1P60897 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sem1P60897 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sem1P60897 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sem1P60897 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sem1P60897 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sem1P60897 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sem1P60897 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sem1P60897 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sem1P60897 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sem1P60897 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.72■□□□□ 0.59
Sem1P60897 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sem1P60897 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sem1P60897 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sem1P60897 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sem1P60897 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sem1P60897 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.72■□□□□ 0.59
Sem1P60897 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sem1P60897 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sem1P60897 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sem1P60897 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sem1P60897 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sem1P60897 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sem1P60897 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sem1P60897 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sem1P60897 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sem1P60897 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sem1P60897 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sem1P60897 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.71■□□□□ 0.59
Sem1P60897 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sem1P60897 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sem1P60897 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.7■□□□□ 0.58
Sem1P60897 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sem1P60897 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Sem1P60897 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sem1P60897 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sem1P60897 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sem1P60897 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sem1P60897 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sem1P60897 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sem1P60897 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sem1P60897 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sem1P60897 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sem1P60897 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Sem1P60897 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sem1P60897 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sem1P60897 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sem1P60897 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.69■□□□□ 0.58
Sem1P60897 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sem1P60897 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sem1P60897 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sem1P60897 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms