Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd3P55096 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.65■□□□□ 0.42
Abcd3P55096 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.65■□□□□ 0.42
Abcd3P55096 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd3P55096 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd3P55096 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd3P55096 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd3P55096 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd3P55096 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd3P55096 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Abcd3P55096 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd3P55096 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd3P55096 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.64■□□□□ 0.41
Abcd3P55096 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd3P55096 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd3P55096 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd3P55096 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.64■□□□□ 0.41
Abcd3P55096 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd3P55096 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Abcd3P55096 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
Abcd3P55096 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd3P55096 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd3P55096 Golph3-202ENSMUST00000226517 2359 ntBASIC17.64■□□□□ 0.41
Abcd3P55096 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd3P55096 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd3P55096 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.63■□□□□ 0.41
Abcd3P55096 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.63■□□□□ 0.41
Abcd3P55096 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd3P55096 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Abcd3P55096 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd3P55096 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.63■□□□□ 0.41
Abcd3P55096 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd3P55096 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd3P55096 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd3P55096 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Abcd3P55096 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.62■□□□□ 0.41
Abcd3P55096 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd3P55096 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd3P55096 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd3P55096 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Abcd3P55096 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Abcd3P55096 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd3P55096 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.62■□□□□ 0.41
Abcd3P55096 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd3P55096 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd3P55096 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd3P55096 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.62■□□□□ 0.41
Abcd3P55096 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd3P55096 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.62■□□□□ 0.41
Abcd3P55096 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd3P55096 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Abcd3P55096 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Abcd3P55096 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.61■□□□□ 0.41
Abcd3P55096 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd3P55096 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd3P55096 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd3P55096 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd3P55096 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Abcd3P55096 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd3P55096 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd3P55096 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Abcd3P55096 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcd3P55096 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Abcd3P55096 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.6■□□□□ 0.41
Abcd3P55096 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.6■□□□□ 0.41
Abcd3P55096 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Abcd3P55096 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.6■□□□□ 0.41
Abcd3P55096 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcd3P55096 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcd3P55096 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcd3P55096 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcd3P55096 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Abcd3P55096 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcd3P55096 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcd3P55096 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Abcd3P55096 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
Abcd3P55096 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.59■□□□□ 0.41
Abcd3P55096 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.59■□□□□ 0.41
Abcd3P55096 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
Abcd3P55096 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcd3P55096 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcd3P55096 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcd3P55096 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Abcd3P55096 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Abcd3P55096 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Abcd3P55096 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Abcd3P55096 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Abcd3P55096 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Abcd3P55096 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcd3P55096 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcd3P55096 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Abcd3P55096 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Abcd3P55096 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abcd3P55096 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abcd3P55096 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Abcd3P55096 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Abcd3P55096 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.57■□□□□ 0.4
Abcd3P55096 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.57■□□□□ 0.4
Abcd3P55096 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Abcd3P55096 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms