Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Nub1P54729 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nub1P54729 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nub1P54729 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.2■□□□□ 0.98
Nub1P54729 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.2■□□□□ 0.98
Nub1P54729 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nub1P54729 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nub1P54729 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nub1P54729 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nub1P54729 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Nub1P54729 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nub1P54729 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nub1P54729 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nub1P54729 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Nub1P54729 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nub1P54729 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Nub1P54729 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nub1P54729 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.19■□□□□ 0.98
Nub1P54729 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nub1P54729 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nub1P54729 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.18■□□□□ 0.98
Nub1P54729 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Nub1P54729 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nub1P54729 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Nub1P54729 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nub1P54729 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nub1P54729 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Nub1P54729 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nub1P54729 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nub1P54729 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nub1P54729 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nub1P54729 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nub1P54729 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nub1P54729 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nub1P54729 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nub1P54729 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nub1P54729 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nub1P54729 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nub1P54729 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nub1P54729 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nub1P54729 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Nub1P54729 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Nub1P54729 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nub1P54729 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nub1P54729 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nub1P54729 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nub1P54729 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nub1P54729 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.16■□□□□ 0.98
Nub1P54729 Gm45417-201ENSMUST00000209533 758 ntBASIC21.16■□□□□ 0.98
Nub1P54729 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nub1P54729 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.15■□□□□ 0.98
Nub1P54729 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nub1P54729 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nub1P54729 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nub1P54729 Gm12251-201ENSMUST00000117893 792 ntBASIC21.15■□□□□ 0.98
Nub1P54729 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.15■□□□□ 0.98
Nub1P54729 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nub1P54729 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nub1P54729 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
Nub1P54729 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nub1P54729 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nub1P54729 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nub1P54729 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nub1P54729 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nub1P54729 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Nub1P54729 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nub1P54729 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nub1P54729 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nub1P54729 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nub1P54729 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nub1P54729 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Nub1P54729 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.13■□□□□ 0.97
Nub1P54729 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nub1P54729 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nub1P54729 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nub1P54729 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nub1P54729 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nub1P54729 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nub1P54729 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nub1P54729 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nub1P54729 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nub1P54729 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nub1P54729 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nub1P54729 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nub1P54729 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.12■□□□□ 0.97
Nub1P54729 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nub1P54729 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nub1P54729 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nub1P54729 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Nub1P54729 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nub1P54729 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Nub1P54729 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nub1P54729 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.12■□□□□ 0.97
Nub1P54729 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nub1P54729 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Nub1P54729 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nub1P54729 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nub1P54729 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Nub1P54729 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.11■□□□□ 0.97
Nub1P54729 Mir7075-201ENSMUST00000184187 82 ntBASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms